KEGG   Solanum pennellii: 107032205
Entry
107032205         CDS       T04130                                 
Name
(RefSeq) sm-like protein LSM36B
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
spen  Solanum pennellii
Pathway
spen03018  RNA degradation
spen03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107032205
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107032205
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spen03019]
    107032205
   03041 Spliceosome [BR:spen03041]
    107032205
Messenger RNA biogenesis [BR:spen03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     107032205
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     107032205
Spliceosome [BR:spen03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    107032205
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 107032205
NCBI-ProteinID: XP_015089276
Position
10:77019337..77022747
AA seq 90 aa
MSGAGEKGSTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG
QLKNKYGDAFIRGNNVLYISTSKKTLGEGA
NT seq 273 nt   +upstreamnt  +downstreamnt
atgagtggagcaggagagaaaggatcaacaaccaagactccagcagattttctcaagtct
attcgtggacgacctgttgttgtcaaattgaactctggtgttgactatcgaggtatcctt
gcctgtttagatggatacatgaatatagcaatggagcaaaccgaagaatatgttaatggg
caattgaagaacaaatatggtgatgctttcattcgtggaaacaacgtgctttacatcagc
acatcaaagaagacactaggggagggagcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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