KEGG   Sphingomonas psychrotolerans: CVN68_21600
Entry
CVN68_21600       CDS       T05307                                 
Symbol
gspD
Name
(GenBank) type II secretion system protein GspD
  KO
K02453  general secretion pathway protein D
Organism
sphc  Sphingomonas psychrotolerans
Pathway
sphc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sphc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CVN68_21600 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sphc02044]
    CVN68_21600 (gspD)
Secretion system [BR:sphc02044]
 Type II secretion system
  General secretion pathway protein
   CVN68_21600 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: ATY34233
UniProt: A0A2K8MK42
Position
4766798..4768813
AA seq 671 aa
MALAVAGCAGNPPPRPIAVPETPAIVREAERAAPLVRSTIVGGESPPPAAPVPPRQSATP
GDIGINLPRADVRTVAASVQQITGIAVEVEAGVSGQVSLVTPGNVARSEIIPLFETALRA
ANLALAPVGNGYVVRTVTAAQAPVAPDAVGFGTQVVSLEFINAEEVKKVLDGALPGVVTA
VDAAGNRITIAGTTGQRASARDLVKQFDVNWLRNMSFALFVPERTDARLIVPELEKLINA
ADAPTRGLVRLIAMERLNGILAVSAQRQYLDDVRRWIEVLDREGESAERRIFVYRVQNGR
ARDLAGTLNRAFGNGGGGDDTGNEDPFAANDQPAARTASPAPKPGANAAQPGSGAANAAP
DAGGRESPATGGKITADDVNNAVVVYGTPRDYATIEDALRKLDVPPVQVMIEAAITEVTL
TDTLRYGVQWNWLTGDSNFRVTDGAAMPTGPTQAGFSYFLAGSSISVALNALEQRTNIKV
VSAPKLVTLNNQTAALQVGDQVPVSSGSAVSVDNPNAPIVNSIDYRDTGVILKVTPRVNA
GGLVLLDISQEVSDVNVNAPNASGDRTPASPTISTRRISTSVAVQDGQVIALGGLFRESK
SLGKNGIPILSRIPVIGGLFGSHNNVQNRTELIVLLKPHVIRTPDDGRAVTEELRAKLRT
LEPFRTEGRIP
NT seq 2016 nt   +upstreamnt  +downstreamnt
atggcgctcgcggtcgccggctgtgccggcaatccgccgccccggcccatcgccgtcccc
gagacgccggcgatcgtgcgcgaggcggagcgcgctgcgccgctggtgcgctcgacgatc
gtcggcggcgagagcccgccaccggcggcgcccgtgccgccgcggcagagcgcgacgccg
ggcgatatcgggataaacctgccgcgggccgatgtccgcacggttgcggcttcggtacag
cagatcaccggaatcgccgtcgaggtcgaggcgggggtcagtgggcaggtctcgctcgtc
accccgggaaatgtcgcgcgatcggagatcatcccgctgttcgagaccgcgctgcgcgcc
gccaacctcgcgcttgcgccggtgggcaatggctatgtcgtgcggacggtgactgccgcc
caggccccggtcgctcctgacgcggtcggcttcggcacccaagtggtttcgctggagttc
atcaatgccgaggaagtgaagaaggtgctcgacggcgcgcttccgggcgtcgtcactgca
gtcgacgcggcgggcaaccgcatcaccatcgccgggacgaccggccagcgcgcgagcgca
cgcgacctggtcaagcaattcgacgtcaactggctgcgcaatatgagcttcgcattgttc
gtgcccgaacgcaccgatgcgcggctgatcgtccccgagctcgaaaagctgattaatgcc
gccgatgcgccgacgcgcggcctcgtccggttgatcgcgatggagcgattgaacggcatc
ctcgcagtgagcgcccagcgccaatatctcgacgatgtccgtcggtggatcgaggtgctc
gaccgcgaaggcgagagcgccgagcgccggattttcgtctatcgcgtccagaacggccgc
gcacgcgatctggcgggcacgctcaaccgcgcgttcggcaatggcggcggcggcgatgac
acggggaacgaagaccccttcgccgccaacgaccagcccgcggcccgcactgcttcgccc
gcgccgaagccgggcgccaatgccgcacagccgggaagcggcgccgcgaatgccgcgccc
gatgccggcggtcgcgagagtcccgccacgggcggcaagatcactgcggacgacgtcaac
aacgcagtcgtcgtctacggcactccgcgcgactatgcgacgatcgaggatgcgctgcgc
aagctcgacgtgcctcccgttcaggtgatgatcgaagcggcgatcaccgaagtgaccctg
accgacaccctgcgctacggggtccagtggaactggctgaccggagacagcaatttccgc
gtcaccgacggggctgccatgcccaccgggccgacccaggcgggcttctcctattttctc
gccgggagcagcatctcggtcgcgctcaacgcgctcgagcagcggaccaacatcaaggtg
gtgtctgcccccaaattggtcacgctcaacaaccagaccgcggcgctgcaggtcggcgac
caggtgccggtgtcatcgggaagcgcggtcagcgtcgacaatcccaacgcgccgatcgtc
aattcgatcgactatcgcgacaccggcgtgatcctcaaggtcacgccccgggtgaatgcc
ggggggctcgtcctgctcgacatttcgcaggaagtgagcgacgtcaacgtcaacgcgccc
aatgcgagcggcgacaggactccggcatccccgaccatctcgacgcggcggatctcgact
tcggtcgcggtgcaggacggtcaggtcatcgcgctgggcgggctgttccgagagtcgaag
agcctcggcaagaacggcattccgatcctgtcgcggatcccggtcatcggcgggctgttc
ggcagccacaacaatgtccagaaccgcaccgaactgatcgtgttgctcaagcctcacgtg
atccgcacacccgacgacggccgcgcggtcaccgaggaactgcgcgccaagctgcgcacg
ctcgagccgttccgcaccgaggggcggatcccatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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