KEGG   Rhizorhabdus wittichii DC-6: HY78_05810
Entry
HY78_05810        CDS       T05200                                 
Name
(GenBank) conjugal transfer protein TraG
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
sphd  Rhizorhabdus wittichii DC-6
Pathway
sphd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sphd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HY78_05810
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sphd02044]
    HY78_05810
Enzymes [BR:sphd01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     HY78_05810
Secretion system [BR:sphd02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   HY78_05810
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind
Other DBs
NCBI-ProteinID: ARR52994
Position
complement(1216122..1218152)
AA seq 676 aa
MSATKILWGQVFAVFLIVLAALWTATQWTAAALAYQPELGAPWFMLGDWPIYPPPAFFWW
WFSFDAYAPEIFETGAFIAVSGGFAAIVVAIGMSVWRARELKNAETYGSARWATRGEIAA
AGLLGPNGLMLGRLGRDYLRHDGPEHVLCFAPTRSGKGVGLVVPTLLTWPGSAIVHDIKG
ENWQLTAGFRARHARVLLFDPTNGASAAYNPLLEIRKGAWEVRDVQNVADVLVDPEGSLE
KRNHWEKTSHALLVGTILHVLYAEADKTLAGVAAFLSDPRRPIESTLWAMMTTPHLGEAG
VHPVVASAARELLNKSANERSGVLSTAMSFLGLYRDPVVAQVTRTCEWRIKDLVEGELPV
TLYLVVPPSDISRTKPLIRLILNQIGRRLTEDLKARQSRHRLLLMLDEFPALGRLDFFES
ALAFMAGYGIQSFLIAQSLNQIEKAYGPNNAILDNCHVRVSFATNDERTAKRISDALGTA
TEMRAMKNYAGHRLSPWLGHLMVSRSETARQLLTPGEIMQLPPDDEIVMVAGIPPIRAKK
VRYFKDRRFTQRVTSPPDSNVGGGPPRPDDWSGLAPIEAPPMPEPIEHESPKKPKKKKAA
RKADAEDDAANADLRREPALERHIDIAPTPRPAPANEFELDEPDPDSDAARQATVRRQMQ
RVARQASLDPDDGIEL
NT seq 2031 nt   +upstreamnt  +downstreamnt
atgtcggcaaccaaaatcctttggggtcaggtcttcgcggtcttcctgatcgtgctcgcc
gccctgtggaccgcgacgcaatggaccgccgcggcgctcgcctatcagcccgagcttggg
gcgccctggttcatgctcggcgactggccgatctatccgccgccggccttcttctggtgg
tggttctcgttcgacgcctacgcgccggagatattcgagacgggcgcgttcatcgccgtg
tcgggcgggttcgccgcgatcgtcgtcgccatcggcatgtcggtatggcgcgcgcgcgag
ctgaagaacgccgagacctacggctcggcgcgctgggcgacgcgcggggagatcgccgcc
gccgggctgctcgggccgaacggcctcatgctcggccggctcgggcgcgactacctgcgc
cacgacggccccgagcatgtgctgtgcttcgcgccgacccggagcggcaagggcgtcggc
ctcgttgtgccgacgctgctcacctggccgggctcggccatcgtgcatgacatcaaaggc
gagaactggcagctcaccgccggctttcgcgcccggcacgcgcgggtgctgctgttcgat
ccgaccaacggcgcgtcggccgcctacaaccctctgctcgaaatccgcaagggcgcctgg
gaagtgcgcgacgtgcagaacgtcgccgacgtgctggtggacccggaaggctcgctggag
aagcgaaaccactgggagaagacctcccacgccttgctggtcggcacgatcctccatgtc
ctctacgccgaggccgacaagacgctggcgggtgtcgccgccttcctgtccgatccccgc
cgcccgatcgaaagcaccctatgggcgatgatgacgacgccgcatttgggcgaggcgggc
gtccatcccgtcgtcgcttcggccgcgcgcgagctgctcaacaaatcggccaacgaacga
tcgggcgtgctctcgaccgccatgtcgttcctcggcctctatcgcgatcccgtcgtcgcg
caggtcacgcgcacctgcgagtggcggatcaaggatctggtcgagggcgagctgccggtg
acgctctacctcgtcgtgccgccgtccgacatctcgcgcaccaagccgctcatccgcctc
atcctcaaccagatcggccgccgtctcaccgaagacctgaaggcgcggcagtcgcgccac
cggctgctcttgatgctcgacgagtttcccgcgctggggcggctcgacttcttcgagagc
gcgctggccttcatggccggctacggcatccagagcttcctcatcgcccagagcctcaat
cagatcgagaaggcttacgggccgaacaacgcgatcctcgacaactgccatgtgcgcgtg
tcgttcgccaccaacgacgaacgcaccgccaaacgcatctcggacgcgctcgggaccgcc
accgaaatgcgcgcgatgaagaactacgccggccaccggctctcgccctggctcgggcat
ctgatggtctcgcgctccgagacggcgcggcagctcctcacgcccggcgaaatcatgcag
ctcccgcccgacgacgagatcgtcatggtcgcgggcatcccaccgatccgggcgaagaag
gtccgctacttcaaggaccggcggttcacgcagcgggtgacgtcgccgcccgacagcaat
gtcggcggcggcccgccgcgtcccgacgactggagcggactggcgccgatcgaggcgccg
ccgatgcccgagccgatcgagcatgaatctcccaagaagccgaagaagaaaaaggccgcc
aggaaggcggatgccgaggacgatgccgccaacgcggacctgcgccgcgagccggcgctg
gagcgccatatcgacatcgcgccgacgccccggccggcgcccgccaacgagttcgagctg
gacgagccggaccccgatagcgacgcggcgcggcaggcgacggtgcgccgccagatgcag
cgcgtggcccggcaggcgtcgctcgatcccgacgacggcatcgagctatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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