KEGG T05200: HY78

Rhizorhabdus wittichii DC-6: HY78_13375

Entry

HY78_13375        CDS       T05200

Name

(GenBank) phenylalanine--tRNA ligase subunit beta

K01890

phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]

Organism

sphd Rhizorhabdus wittichii DC-6

Pathway

sphd00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:sphd00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    HY78_13375
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:sphd01007]
    HY78_13375
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sphd03016]
    HY78_13375
Enzymes [BR:sphd01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     HY78_13375
Amino acid related enzymes [BR:sphd01007]
Aminoacyl-tRNA synthetase
  Class II (U)
   HY78_13375
Transfer RNA biogenesis [BR:sphd03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    HY78_13375
Prokaryotic type
    HY78_13375

SSDB

Motif

Pfam:

B3_4 tRNA_synthFbeta FDX-ACB tRNA_bind B5 Stealth_CR1

Other DBs

NCBI-ProteinID:

ARR54347

Position

2763290..2765668

AA seq 792 aa
MKFTLSWLKEHLDTEAGLDAIVEGLTRVGLEVEGVEDAAEKLGAFRIARILTAAPHPQAD
KLQVLSVDAGDGGDPLQIVCGAPNARAGLVGVLGRPGDYVPGIDVTLKVAAIRGVESRGM
MCSMRELELSDAHDGIIELPADAPVGAVYADWAGLSDPVIDVAITPNRQDCMGVRGIARD
LAAAGLGALRPLNLPSIIGQGECPIEIRTDDPEGCPAFFGRAVRGVVNGDSPEWLAKRLI
AVGQRPISALVDITNYVMLDHGRPLHVYDLAKLSGPLVARKATPGEEVLALNGKSYTLDE
TMTVIADANGPDDIGGIMGGEKTGVTAATTDVLIECAYFTPEAIARTGQKLGLTSDARAR
FERGVDPQFLEAGLAIATRLVTELCGGTPSPVVQAGTPPSGTKALRYDPTLTEKIAGLAV
EPDRQRTILAALGFGIDAVWNVSVPSWRRDVDGPADLVEEVVRIIGIDNIPSTPLPRGEG
VARPTATQAQKVERRARRTAAARGLNEAVTWSFISEAEARPFGGGAWTLANPISEELKVM
RPSLLPGLVAAARRNADRGAGSIRLFEVGRRYLADGEGLTLGLLLAGDRTPRDWRSGKAQ
AFDAFDAKAEAVAMLGAVGAPVDRLQLFETVSSGVYHPGRSGSLRLGPKTVLAEFGELHP
SVARAFDIDGTVVAAEVFLDAVPVKRASSDHMREAYAPPALQAVRRDFAFLVSADRAADE
LLRAVRGADKAAIAEARLFDLFQGQGVGEGEKSVAIEVVLQPSEKSFTDADLQAISEKIV
AAAAKLGAKLRG

NT seq 2379 nt +upstreamnt +downstreamnt
atgaagttcacgctgagctggctcaaggagcatctggacaccgaggcgggcctcgacgcg
atcgtcgaagggctgacccgggtcggcctggaggtcgagggcgtcgaggacgcggccgag
aagctgggcgccttccgcatcgcccgcatcctgaccgcggcgccgcacccgcaggcggac
aagctgcaggtcctgtcggtcgacgccggcgacggcggcgatccgctgcagatcgtctgc
ggcgcgcccaatgcgcgcgcggggctggtcggcgtgctcggccggccgggcgactatgtc
cccggcatcgacgtcaccctgaaggtcgcggcgatccgcggcgtcgaatcgcgcggcatg
atgtgctcgatgcgcgagctcgagctgagcgacgcgcatgacgggatcatcgagctgccg
gccgacgcgccggtcggcgcggtctatgccgactgggcgggcctgtccgatccggtcatc
gacgtcgcgatcaccccgaaccggcaggactgcatgggcgtgcgcggcatcgcgcgcgac
ctggcggcggcgggcctcggcgcgctcaggccgctcaacctgccgtccatcatcggccag
ggcgaatgcccgatcgagatccgcaccgacgatcccgagggctgccccgccttcttcggc
cgggcggtgcgcggcgtcgtcaacggcgacagtcccgaatggctggccaagcggctgatc
gcggtcggccagcggccgatctcggcgctggtcgacatcaccaactatgtgatgctggac
catggccgcccgctccacgtctatgacctcgccaagctcagcggcccgctggtcgcgcgc
aaggcgaccccgggcgaagaggttcttgccctcaacggcaagagctacacgctcgacgag
acgatgacggtgatcgccgacgccaacggccccgacgacatcggcggcatcatgggcggc
gagaagaccggcgtcaccgccgccaccaccgacgtgctgatcgaatgcgcctatttcacg
ccggaggcgatcgcccgtaccggccagaagctgggcctgacctccgacgcgcgggcgcgg
ttcgagcgcggcgtcgacccgcagttcctcgaagccggcctcgccatcgcgacccggctg
gtgaccgagctgtgcggcggcacgccgagcccggtcgtccaggcgggcaccccgccctcg
ggcaccaaggcgctgcgctacgatccgacgctgaccgagaagatcgccggcctcgcggtc
gagcccgatcgccagcgcaccatcctggcggcgctgggcttcggcatcgacgcggtctgg
aacgtctcggtgccgagctggcgccgcgacgtcgacggcccggccgacctggtcgaggag
gtcgtccgcatcatcggcatcgacaatatcccgtcgaccccgctgccgcgcggcgagggt
gtcgcccggccgaccgcgacccaggcgcagaaggtggagcgccgcgcccgccgcaccgcc
gccgcgcgcggcctcaacgaggcggtgacgtggagcttcatcagcgaggcggaggcgcgg
ccgttcggcggcggcgcgtggacgctcgccaacccgatcagcgaggagctgaaggtcatg
cggccgtcgctgctgcccgggctggtcgccgccgcgcggcgcaacgccgatcgcggcgcc
ggcagcatccgcctgttcgaggtcggccgccgctatctcgccgacggcgaggggctgacg
ctcggcctgctgctggccggcgaccgcaccccgcgcgactggcgcagcggcaaggcgcag
gcgttcgacgcgttcgacgccaaggccgaggcggtggcgatgctcggcgcggtcggcgcg
ccggtcgatcggctgcaactgttcgagacggtgtcgagcggggtctatcaccccggccgc
tcgggatcgctgcggctggggccgaagacggtgctggccgagttcggcgaactgcacccg
agcgtggcgcgcgccttcgacatcgacggcaccgtcgtcgcggcggaagtgttcctcgac
gcggtgccggtcaagcgcgcctcgtccgaccatatgcgcgaggcctatgcgccgcccgcg
ctgcaggcggtgcgccgcgacttcgccttcctcgtctctgccgaccgggcggccgacgaa
ctgctccgcgcggtgcgcggcgccgacaaggcggcgatcgccgaggcgcggctgttcgac
ctgttccagggccagggcgtcggcgagggcgagaagtcggtggcgatcgaggtggtgctc
cagcccagcgagaagagcttcaccgatgccgacctccaggcgatctccgagaagatcgtc
gcggcggcggcgaagctgggggcgaagctcaggggctaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (23)   

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