KEGG   Rhizorhabdus wittichii DC-6: HY78_20140
Entry
HY78_20140        CDS       T05200                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10943  two-component system, response regulator FlrC
Organism
sphd  Rhizorhabdus wittichii DC-6
Pathway
sphd02020  Two-component system
sphd02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:sphd00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HY78_20140
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    HY78_20140
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:sphd02022]
    HY78_20140
   02035 Bacterial motility proteins [BR:sphd02035]
    HY78_20140
Two-component system [BR:sphd02022]
 Other families
  FlrB-FlrC (polar flagellar synthesis)
   HY78_20140
Bacterial motility proteins [BR:sphd02035]
 Flagellar system
  Flagellar assembly proteins
   Others
    HY78_20140
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 HTH_8 AAA_5 HTH_30 AAA_3 MCM AAA_19 MerR HTH_23 AAA_2 AAA_22
Other DBs
NCBI-ProteinID: ARR55585
Position
complement(4222887..4224164)
AA seq 425 aa
MVMIGISEKAQGSQPTLVSWLAGAGIETMLIDPAATQGRDGRRILHVTEVGMARQQDVLI
DFADGTPVLRRAKVGRPATAIFGFEDMAFGHALIAELIRPRPMPACGEPESARFIGIAAR
VARSDATVLLLGETGTGKEGVARYIHAASPRADKPFVAVNCAALPETMLEAMLFGHQKGA
FTGASGAGEGLFRAAEGGTLLLDEIAELPLALQAKLLRALQEREVLPVGATAPVAVDLRI
IAAGNRDLAVEVEAGRFRADLYWRLNVMPLVLKPLGARRQDIRAIAAALMLRHTPEHEEL
AWPTAQALDRLMAHDWPGNVRELENVLQRAMLMRDGARIVAEDLIIDRTRAAPRAAVAAV
ETAPAAPVVAEPTPIRLADAKRISQARAIEEALAATGGHRLRAAQRLGISERTLRYRMAD
MRAVA
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggtgatgatcggcatcagcgagaaggcgcagggttcgcagccgacgctcgtgtcgtgg
ctggccggcgccggcatcgagacgatgctgatcgatccggccgcgacccagggccgcgac
ggccgccgcatcctgcacgtcaccgaagtcggcatggcccggcagcaggacgtgctgatc
gatttcgccgacggcaccccggtgctgcgccgcgccaaggtcggccgcccggcgaccgcc
atcttcggcttcgaggacatggcgttcggccacgcgctgatcgccgagctgatccgtccc
cgcccgatgcccgcctgcggcgagcccgagagcgcgcgcttcatcggcatcgccgcgcgc
gtcgcccggagcgacgccaccgtcctgctgctcggcgagaccggcaccggcaaggagggc
gtcgcccgctacatccacgccgcctcgccccgcgccgacaagccgttcgtcgcggtcaat
tgcgcggcgctgcccgaaaccatgctcgaagcgatgctgttcggccaccagaagggcgcc
ttcaccggcgccagcggcgcgggcgaaggcctgttccgcgcggccgagggcggcacgctg
ctgctcgacgagatcgccgagctgccgctcgcgctccaggccaagctgctccgcgcgctc
caggagcgcgaggtcctgcccgtcggcgccaccgcgccggtcgcggtcgacctgcgcatc
atcgccgccggcaaccgcgacctcgcggtcgaggtcgaggccggccgcttccgcgccgac
ctctactggcggctcaacgtcatgccgctcgtcctcaagccgctcggcgcccgccgccag
gacatccgcgcgatcgccgccgccctgatgctgcgccacacgcccgagcatgaggagctg
gcctggccgaccgcgcaggcgctcgaccggctgatggcgcatgactggcccggcaatgtc
cgcgagctggagaacgtcctgcagcgcgcgatgctgatgcgcgacggcgcgcggatcgtc
gccgaagacctgatcatcgaccgcactcgcgccgcgccgcgcgctgccgtcgccgccgtc
gaaaccgcgccggccgcgcccgtcgtcgccgaaccgacgccgatccgcctggccgacgcc
aagcggatcagccaggcccgcgcgatcgaggaagcccttgccgccaccggcggccaccgt
ctccgcgccgcccagcggctcggcatctccgaacgcaccctgcgctatcgcatggccgat
atgcgcgcggtggcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (21)   

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