KEGG   Rhizorhabdus wittichii DC-6: HY78_20465
Entry
HY78_20465        CDS       T05200                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
sphd  Rhizorhabdus wittichii DC-6
Pathway
sphd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sphd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HY78_20465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sphd03400]
    HY78_20465
Enzymes [BR:sphd01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     HY78_20465
DNA repair and recombination proteins [BR:sphd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     HY78_20465
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: ARR55646
Position
complement(4285976..4286674)
AA seq 232 aa
MEPIAEPPADCALCPRLAAYRATQRIENPSWFNAPVPTFGDSGARLVIVGLAPGLKGANR
TGRAFTGDGSGTMLFDVLADHGLARGGHGHDADDGLRLDGTVIVNAVRCVPPANRPTPAE
VRACRPFLAGPLNGAPAPRVIVALGRIAHDATLAALGETPARFRFAHGAEHRPEGSILID
SYHCSRYNQNTGRLTYKMLWSIFEKAIRYMSESPFQSPENIGNSAPKARERT
NT seq 699 nt   +upstreamnt  +downstreamnt
atggagccgatcgccgaaccgcccgccgactgcgccctgtgcccccggctggccgcctat
cgggcaacgcagcggatcgaaaatccgagctggttcaatgcgccggtgccgaccttcggg
gattccggcgcccggctcgtcatcgtcgggctcgcaccgggactgaagggcgcgaaccgc
accggacgcgccttcaccggcgatggatcgggcacgatgctgttcgacgtgctggccgat
cacggcctggcgcggggcggccatggccatgatgccgacgacggtctccgcctcgacggc
acggtcatcgtcaatgcggtgcgctgcgtgccccccgccaaccggccgaccccggccgag
gtccgcgcctgccgccccttcctggccggtccgctgaacggcgccccggcgccgcgggtg
atcgtcgcgctcggccgcatcgcccatgacgcgaccctggccgcgctcggcgagacgccc
gcccgctttcgtttcgcccatggcgccgaacaccggccggaagggtcgatcctgatcgac
agctaccactgctcgcggtacaatcagaataccggacggcttacctacaagatgttgtgg
tcgatcttcgagaaggccattcgttacatgtccgaatcacctttccaatcaccagaaaat
atcggtaattcagcgcccaaagcgcgcgaaaggacttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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