KEGG   Rhizorhabdus wittichii DC-6: HY78_28470
Entry
HY78_28470        CDS       T05200                                 
Name
(GenBank) conjugal transfer protein TrbI
  KO
K03195  type IV secretion system protein VirB10
Organism
sphd  Rhizorhabdus wittichii DC-6
Pathway
sphd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sphd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HY78_28470
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sphd02044]
    HY78_28470
Secretion system [BR:sphd02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   HY78_28470
SSDB
Motif
Pfam: TrbI
Other DBs
NCBI-ProteinID: ARR57467
Position
pDC01:105422..106645
AA seq 407 aa
MADEPSPVVRPLPGADPTPERHEILHERGIEPIGGTTPARRNTALIFAGTAMVLGILWVN
SGTGQQSSSRDLTAPAGAARERPDIVARETVDYAAVAPQRRPLGAADTDPNAPVLNPAAG
VPGPEGQIVPAMQPGAAPSGTSAARPTLAEQARRSTLIAYGGRDLGREAGAPTAAGAAGE
APDNAAGAPESGEGRAPNALDLLRQSSSIGEARASMLPNRNFLITAGTLIPCILQTAINS
AQPGYTSCLIPRDVYSENGRVVLMEKGTRVLGEYRGGIQQGQNRLFVLWTRAVTPQGVRI
DLASPGSDALGRAGLAGAVDSFFWARFGGALLLSLVDDAAYIAGQAASSGNGNFNNVTRA
PSEGAAIALQNNINIRPVLKKNQGEEVGIFVAKDFNFADVYNLELRR
NT seq 1224 nt   +upstreamnt  +downstreamnt
atggccgatgaaccgtcccctgtcgtgcgcccgctgcccggtgccgatccaacgcccgaa
aggcacgaaattcttcacgagcgtggaatcgagccgatcggcggcacgacgcccgcgcgg
cgcaacaccgcgctgatcttcgccggcacggcaatggtcttgggtattctctgggtgaat
tccggcacgggccagcaatcctcgtctcgtgacctcaccgcgccggcaggtgcagcccgg
gaacgacccgatatcgtcgctcgggaaacagtcgattatgccgcggtcgcccctcaacgc
cgaccgctcggggcagccgacacggatcccaatgcgccggtgctcaatcctgccgctggc
gttcccggacctgaaggccaaattgtgcccgccatgcagccgggcgcggcaccgagcggg
accagtgccgctcggccaacgcttgccgagcaggcgcggcggtccacgctgatcgcctat
ggaggtcgcgatcttggccgcgaggccggcgcgcccacagctgcaggggctgccggggaa
gcgcccgacaacgctgccggagcgccagagagcggcgagggcagggcgcccaacgcgctc
gatcttttgcggcaaagctcctcgatcggggaagcgcgggcctcgatgctgccgaaccgc
aattttctgattacggcgggcacattgatcccctgcattctgcaaaccgccatcaattcc
gcgcagcccggttacacgtcctgcctgatcccgcgagacgtctattccgagaatggccgg
gtcgtactcatggaaaagggcacgcgcgttctcggcgaatatcgcggcggcatccagcaa
gggcaaaatcgcctgttcgtcctctggacgcgagcggtaacgccccagggcgtgcggatc
gatcttgcctcgcctggctccgatgcactcggccgagccgggcttgcaggcgcggtcgac
agcttcttctgggcgcgttttggcggcgccctgctcctctcactcgtcgatgatgccgcc
tatatcgccggacaggccgcctcgagcggcaatggcaatttcaacaatgtgacccgggcg
cccagcgaaggcgcggcgattgccttgcagaacaatatcaatatccggccggtcctgaag
aagaatcagggcgaggaggtcggcatcttcgtcgccaaggatttcaacttcgccgacgtc
tacaatctggaactgcggcggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (8)   

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