KEGG   Sphingorhabdus sp. M41: AZE99_05820
Entry
AZE99_05820       CDS       T04317                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
sphg  Sphingorhabdus sp. M41
Pathway
sphg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sphg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AZE99_05820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sphg03400]
    AZE99_05820
DNA repair and recombination proteins [BR:sphg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AZE99_05820
SSDB
Motif
Pfam: UvrC_RNaseH_dom HHH_5 GIY-YIG HHH HHH_2 UVR Myb_Cef
Other DBs
NCBI-ProteinID: AMO71438
UniProt: A0A127ME68
Position
1206098..1208035
AA seq 645 aa
MSKAERPDHPNAASRFNEDKATYAVRGEGDTPDLEAGMAAVREVLNTLPTRPGVYRMQDK
RGDVLYVGKARSLKARVGAYVQMNRLPQRLMRMVAQTRSMTIVTTGSEAEALLLEAQLIK
KFRPAYNVLLRDDKSFPFILLRDDHDFPRITKHRGAQRTKGQYFGPFASAGSVNRTINAL
QKLFLLRSCTDSFFNNRSRPCLLYQIKRCSAPCVDRIGKDDYAELVEDARDFLCGKSTDV
QNKLGGAMEKASEALDFEMAAVYRDRLRALTFIQGSQAINAAGLPDADIFALAAKGSTVC
IQAFFIRGGQNWGHRSFFPAHTTNVEIEEVFSSFLMQFYDQMPPPKLVLLDRDLPDADLL
AEALSTKADYKVSVSRPQRGDRRKLLEQASRNAEEALDRRLAETSTQAKIMREMVDLLEL
DAVPDRIEIYDNSHIQGTNMVGGMVVAGPEGFRKNAYRKFNIKNPDIAPGDDFAMMREVL
ERRFSRAQKEDPDRDKGEWPDLVLIDGGKGQMSAARGALSEIGVEDVVMIGVSKGPDRNA
GRETFHLPDGRQINLPMNSPVLFYLQRLRDEAHRFAIGAHRTRRAKSVGHSSLDDVPGIG
PARKKALLLHFGTARAVKNASLDDLQGAPGVSATVAQKIYDYFHA
NT seq 1938 nt   +upstreamnt  +downstreamnt
atgtccaaagccgagcgtcccgaccatcccaatgccgcatcccgtttcaacgaggataag
gcaacctatgcggtgcgcggggagggcgatacccccgatctcgaagccgggatggcagct
gtccgcgaggtgttgaacacgctgccgacacggccaggcgtctaccggatgcaggacaag
cgcggtgacgttctctatgtcggcaaggcgcggtcgctaaaggcccgcgtcggtgcctat
gtccagatgaaccggctgccgcagcgcttgatgcggatggtcgcgcaaacccgttcgatg
accattgtcaccaccggcagcgaagccgaggcattgttgctcgaagcacagctgatcaag
aaattccgcccggcttacaatgtcctgttgcgcgatgataagagctttcctttcatcctg
ctgcgcgacgatcatgattttccacggatcaccaaacatcggggggcgcagcggaccaag
ggacaatatttcggcccctttgccagcgccggatcggtcaaccggacgatcaacgcgctg
cagaaactgtttctgttgcgcagctgtaccgacagctttttcaacaaccgctcgcggccc
tgtctgctctatcagatcaaacgctgctcagcgccctgtgtcgaccggatcggcaaggac
gactatgccgagctggtcgaggatgcgcgcgattttctgtgcggcaaatcgaccgacgtg
cagaacaagctcggcggcgcgatggaaaaggcgtccgaggctctcgatttcgaaatggcg
gcggtttaccgagaccggctgagggcgctgaccttcatccagggcagtcaggcgatcaat
gcagctggcctgccggacgccgatatttttgcgctggcggcgaagggttccactgtctgt
atccaggccttcttcattcgtggcgggcagaactggggccatcgcagcttcttcccggcg
cacacgaccaatgtcgagatagaggaagttttttccagcttcctgatgcaattttacgac
cagatgccgccgccgaagctggtgttgctcgaccgcgacttaccggatgcggatttgctg
gccgaagcgctgagcaccaaggcggactataaggtgagcgtatccaggccgcagcgcggg
gatcggcgtaaattgctggagcaggccagccgcaacgccgaagaggcgctcgaccggcgt
ctggcggaaacctctacccaggcgaagatcatgcgcgaaatggttgatctgctggagctg
gatgcggtgccggatcgcatcgaaatctatgataacagccatattcaggggacgaatatg
gtcggcggcatggtcgtggccggccccgagggtttccgcaagaacgcctatcgaaagttc
aatatcaaaaatcctgatatcgcgcccggcgatgattttgcgatgatgcgcgaagtgctc
gagcggcgtttctcccgcgcgcaaaaggaagatccggatcgcgacaagggcgagtggccg
gatctggtgctgatcgatggcggcaaggggcagatgagcgcggcgcgaggcgctctgtcc
gaaatcggggtcgaggatgtggtgatgatcggcgtgtccaaggggccagaccggaacgcg
gggcgcgagacgttccacttaccggacggccgccagatcaacctgccgatgaacagcccc
gtgctcttctatctccagcgtctgcgcgatgaagcccatcgcttcgcgatcggtgcgcac
cggacccggagagcgaaatctgtcggccatagttcgctggatgacgttcccggcatcggc
ccggcccggaaaaaggcgctgctgctgcatttcggcacggcgcgcgcggtgaaaaacgcc
tcgctcgatgatctgcagggcgcaccaggcgtgtcggcaacggtggcgcagaaaatctac
gactatttccatgcctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (39)   

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