KEGG   Spiroplasma phoeniceum: SDAV_003
Entry
SDAV_003          CDS       T06376                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
sphh  Spiroplasma phoeniceum
Brite
KEGG Orthology (KO) [BR:sphh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sphh03032]
    SDAV_003 (gyrB)
   03400 DNA repair and recombination proteins [BR:sphh03400]
    SDAV_003 (gyrB)
Enzymes [BR:sphh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     SDAV_003 (gyrB)
DNA replication proteins [BR:sphh03032]
 Prokaryotic type
  DNA Topoisomerases
   SDAV_003 (gyrB)
DNA repair and recombination proteins [BR:sphh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      SDAV_003 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c TOPRIM_C HATPase_c_3 Toprim_4
Other DBs
NCBI-ProteinID: AXF95021
UniProt: A0A345DLD3
Position
2866..4785
AA seq 639 aa
MNDNYNSESIQILEGLEAVRKRPGMYIGATNARGLHHLVWEIVDNSIDEVLANFANKIKI
IINKDESITVVDNGRGIPIEIHPKTKVSTLETVFTILHAGGKFDSNTYKISGGLHGVGAS
VVNALSKYLKVKVRKNNKKYVMEFHNGGQILTPIKEVGSTSETGTTVTFLPDEKIFKEIT
IFSFSTIQNRIKQLAFLNKGLEISLVDLREDDEEKMVVYQFNNGIKDYVLELNKTIGTPL
NDVFYVEGIEDNIVVEFGLQYNDNYSENIFSFCNNINTHEGGTHEEGIKLAIVREINNYF
KNINKNNKGNEDKFTWDDIKEGMTTIISIRHPDPQYEGQTKKKLGNSEVKKIVSNIVGKG
LSSYLLENPEDSKKIIEKISLSLKARIAAQSAKETTRRKTVMDSFSLPGKLADCETKDSK
IAELYIVEGDSAGGSAKSGRNRKFQAILPLRGKILNVEKAKQIKIFENNEINSIITSLGA
GIKDNFNDKKLRYQKVIIMTDADVDGAHIRILLLTFFYRYMKDLIENGNIYIAQPPLYKI
QNGNQIEYAYSDNELELYKEELLKQNKNYTIQRYKGLGEMNPEQLWETTMDPEQRLLLKV
SVNNAFEANLICNELMGENVEPRKKFIRENAKYVKNLDV
NT seq 1920 nt   +upstreamnt  +downstreamnt
atgaatgataattataattcagaatcaattcaaattttagaaggtttagaagcagttcga
aaacgaccagggatgtatattggggcgacaaatgctagaggcttacatcatttagtttga
gaaattgttgataactcaattgatgaagttttagctaattttgctaataaaattaaaatt
atcattaataaagatgaatcaattacagttgttgacaatggccgtggaattccaattgaa
attcatccaaaaacaaaagtttcaacattagaaactgtttttactattttacatgcagga
ggaaaatttgattcaaatacatataaaatttctggtggcttacatggagtaggagccagt
gttgttaatgctttaagtaaatatttaaaagttaaagttagaaaaaataataaaaaatat
gtaatggagtttcataatggtggtcaaattttaacaccaattaaagaagttggttcaact
tcagaaactggaacaacagtaacttttttaccagatgaaaagatttttaaagaaataaca
atttttagtttttcaacaattcaaaatcgaattaaacaattagcttttttaaataaagga
ttagaaatatcattagttgatttacgagaagatgatgaagaaaaaatggttgtttatcaa
tttaataatggaattaaagattatgttttagaattaaataaaacaattggtacaccacta
aacgatgttttttatgttgaaggaatagaagataatattgttgttgaatttgggttacaa
tataatgacaattattcagaaaatattttttctttttgtaataacattaatacccatgag
ggtggaacccacgaagaaggtattaaattagccattgttcgtgaaataaataattatttt
aaaaatattaataaaaataataaaggtaacgaagataaatttacttgagatgacattaaa
gaaggaatgacaacaataatttctattcgtcatccggatccgcaatatgaaggtcaaact
aaaaaaaagttaggaaatagtgaagttaaaaaaattgtttctaatattgttggaaaagga
ttaagtagttatttgttagaaaatccagaagattcaaaaaaaattattgaaaaaataagt
ttatcattaaaagcaagaattgctgcacaaagtgcaaaagaaacaacacgtcgtaagacc
gtaatggatagtttttcattaccaggtaaattagcagattgtgaaacaaaagattctaaa
atagctgaactttatattgttgaaggggattctgccggtggaagtgctaaatctggtcga
aatcgaaaatttcaagcaattttaccattacgaggaaaaattttaaatgttgaaaaagca
aaacaaattaaaatatttgaaaataatgaaattaattcaattattacctcattaggagca
ggtattaaagataattttaatgataaaaaattacgttatcaaaaggtaattattatgact
gatgctgatgttgatggtgcacatattcgaattttattattgacatttttttatcgttat
atgaaagatttgattgaaaatggcaatatttatattgctcaaccaccactatacaaaatt
caaaatggtaatcagattgaatatgcttatagtgataatgaattagaactttataaagaa
gaattattaaaacaaaataaaaattatacaattcaacgttataaaggattaggagaaatg
aatccagaacaattatgagaaacaacaatggatccagaacagcgtttattattgaaagtt
tctgttaataatgcatttgaagcaaatttaatttgtaatgaattaatgggtgaaaatgtt
gaaccacgaaaaaaatttattcgtgaaaatgcaaaatatgttaaaaatttagatgtctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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