KEGG   Sphingopyxis fribergensis: SKP52_05945
Entry
SKP52_05945       CDS       T03542                                 
Name
(GenBank) RND efflux system outer membrane lipoprotein
  KO
K18139  outer membrane protein, multidrug efflux system
Organism
sphk  Sphingopyxis fribergensis
Pathway
sphk01501  beta-Lactam resistance
sphk02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sphk00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SKP52_05945
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    SKP52_05945
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:sphk02000]
    SKP52_05945
   01504 Antimicrobial resistance genes [BR:sphk01504]
    SKP52_05945
Transporters [BR:sphk02000]
 Other transporters
  Pores ion channels [TC:1]
   SKP52_05945
Antimicrobial resistance genes [BR:sphk01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    SKP52_05945
   Multidrug resistance, efflux pump MexJK-OprM [MD:M00642]
    SKP52_05945
   Multidrug resistance, efflux pump MexXY-OprM [MD:M00643]
    SKP52_05945
SSDB
Motif
Pfam: OEP
Other DBs
NCBI-ProteinID: AJA08114
UniProt: A0A0A7PDT3
Position
complement(1248292..1249716)
AA seq 474 aa
MKMSRFALTTLLAGVLAACTGPKVATAPVAPVAPPVAWRTDAGPSAPLQRDWWKSFGDPA
LAALIDKALAYNSDIGVAAGRVREARANLALARAQTLPAIDATISGGRSRSVSAFGQPSE
QNFAQPQVQIAYEVDLFGRLADQKSAARDSWFASEAAHDSVQLSVAAAVASNYVTLRGLD
ARLEVARETVRARSESLRIAKSRVGRGYSPKLELQQAQAEYDATAQIVPQIELAIARTED
GLSLLVGDTPRAIDRGTALEQLAVPAVPEGLPSELLRRRPDVAQAEYQLAASDKNLSAVR
KRFLPQVRLTSAAGAAFSTLLGDPITIWSVGGSILAPIFQGGRLTAQADAAGAQRDQAAF
AYRRTALTAFREVEDALASVRLIDAQIAYAQSQRDALAEGLRLATNRYREGYSPYLEQLD
AQRGLLGAELSLIQLRADALSARIQLFQAMGGGWTMCEIPEASCSPVTQGAAPA
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgaaaatgtcgcggttcgcgctgacgaccttgctcgccggggtgctcgccgcctgcacc
gggccgaaggttgcgaccgccccggtggcacccgtcgcgccgcccgtggcgtggcgcacc
gatgccgggccgtccgcgccgctgcagcgcgactggtggaagtcgtttggcgatccggcc
ttggccgccttgatcgacaaggcgctggcctacaacagcgacatcggggtcgccgcgggg
cgcgtgcgcgaggcgcgcgccaatctggcgctcgcacgtgcgcagacactgccggcgatc
gacgcgacgatcagcggcgggcgatcgcggtcggtgagcgcctttggccagccgtccgag
cagaattttgcgcagccgcaggtgcagatcgcctatgaagtcgatctgttcggccgcctc
gccgaccaaaaatcggcggcgcgcgatagctggtttgcgagcgaagcggcgcacgatagc
gtgcagctgtcggtcgcggcggcggtcgcgagcaattatgtcacgctacgcggcctcgac
gcacggctggaggtcgcgcgcgagaccgtgcgcgcacgatcggaatcgctgcggatcgcg
aaatctcgagtcggtcggggttattcgcccaagctcgagcttcagcaagcgcaggccgaa
tatgacgcaaccgcgcaaatcgtgccgcagatcgaactcgccatcgcgcgcactgaagac
gggcttagcctgctggtcggcgacacgccgcgcgccatcgaccgcggcacggcgcttgag
cagcttgccgtgcccgccgttcccgaaggcctgccgtccgaactgctgcgccgccggccc
gacgtcgcgcaggccgaatatcagctcgcggcgtcggacaagaatctctccgccgtgcgc
aagcgcttcctgccacaggtgcgcctcacctcggccgctggcgcggccttttcgacgctg
ctcggcgacccgatcacgatctggtcggtcggcggcagcatcctcgcgccgatctttcag
ggcgggcggctgacggcacaggccgatgcggcgggggcgcagcgagaccaggccgccttt
gcgtaccgccgcaccgcgctcactgcgttccgcgaagtcgaggatgcgctcgcgtcggtc
cgtctgatcgacgcacaaatcgcgtacgcccagtcgcagcgcgacgcgcttgccgaagga
ctccggctggcaaccaaccgctatcgcgaaggctattcgccctacctcgaacaactcgac
gctcagcgcggcctgctcggcgccgagctgtcgttgatccagctccgcgccgacgcactc
tcggcgcgcatccagctgttccaggcgatgggcggcggttggacgatgtgcgagattccg
gaagcgtcgtgttcgccggttacccaaggcgccgctccggcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (2)   
   KEGG MODULE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (22)   

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