KEGG   Sphingopyxis fribergensis: SKP52_06625
Entry
SKP52_06625       CDS       T03542                                 
Symbol
lysS
Name
(GenBank) Lysine-tRNA ligase
  KO
K04566  lysyl-tRNA synthetase, class I [EC:6.1.1.6]
Organism
sphk  Sphingopyxis fribergensis
Pathway
sphk00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:sphk00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    SKP52_06625 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:sphk01007]
    SKP52_06625 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sphk03016]
    SKP52_06625 (lysS)
Enzymes [BR:sphk01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     SKP52_06625 (lysS)
Amino acid related enzymes [BR:sphk01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   SKP52_06625 (lysS)
Transfer RNA biogenesis [BR:sphk03016]
 Prokaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    SKP52_06625 (lysS)
SSDB
Motif
Pfam: tRNA-synt_1f tRNA-synt_1g tRNA-synt_1b Anticodon_2
Other DBs
NCBI-ProteinID: AJA08248
UniProt: A0A0A7PGB8
Position
1395759..1397360
AA seq 533 aa
MTDLHLHPSLREPAQTSKAWPFEEARKLVKRYPDGKPGGEAVLFETGYGPSGLPHIGTFN
EVLRTTMVRRAYEALTGGAPTRLVAFSDDMDGLRKVPDNVPNGDMLREYLGKPLTAIPDP
FGKFESFAHHNNAMLREFLDRFGFEYEFVSSTERYKTGAFDDALRNVLRHNQDILDIMLP
TLRAERAATYSPILPVSPKSGIVLQVPVTVVDADAGLVSFEDEGETITHSILGGGAKLQW
KVDWAMRWVALGVDYEMYGKDLTDSGTQSGKIAKALGGRKPEGLIYEMFLDEKGEKISKS
KGNGLSLEQWLDYGSEESLAFFAYREPKAAKQLHIGVIPKAVDEYLQMRGNYAAQEPDKK
LGNPVHHVHVARGEDMPSAELPVTFGLLLNLVGVMGADASKDQIWRYLGQYVAGANAEAY
PELDRLIDNAMAYNRDYVAPTLKRRKPAGGEGAALADLDTKLAALPADASADDIQNIVYE
IGKNEAYGFESLRDWFKALYETLLGSSAGPRMGSFVALFGVENTRRLIAEALA
NT seq 1602 nt   +upstreamnt  +downstreamnt
atgactgacctgcaccttcacccttcgctgcgcgaacccgcgcaaacgtccaaggcctgg
ccgttcgaggaagcgcgcaagctggtcaaacgctatcccgatggcaagccgggcggcgag
gcggtcttgttcgagacgggttatggtccctcgggcctgccgcatatcggcaccttcaac
gaagtgctgcgcaccacgatggtccgccgcgcctatgaggcgctgaccggcggcgcgccg
acgcggctggtcgcgttcagcgacgatatggacgggttgcgcaaggttcccgacaatgtg
ccgaacggcgacatgctgcgcgaatatctgggcaagccgctcaccgcgatccccgacccg
ttcgggaagtttgagagtttcgcgcatcataacaatgcgatgctgcgcgagtttctcgac
cgcttcggcttcgaatatgaatttgtcagttcgaccgagcgctacaagacgggcgcgttc
gacgacgcgctgcgaaatgtcctccgccacaatcaggacattctcgacatcatgttgccg
acgctccgcgccgagcgcgccgcgacctattcgccgatcctgccggtgagcccgaagtcg
ggcatcgtgctgcaggttccggtgaccgtggtcgatgccgacgccggtctggtatcgttc
gaggacgagggcgagacgatcacccactcgatccttggcggcggcgcgaagctgcaatgg
aaggtcgactgggcgatgcgctgggtcgcgctcggcgtcgattacgagatgtatggcaag
gatctaaccgacagcggcacccagtcgggcaagattgccaaggcgcttggcgggcgcaag
cccgaggggctgatctacgaaatgttcctcgacgaaaagggcgagaagatttcgaagtcg
aagggcaatggcctcagcctcgaacaatggctcgactatggcagcgaggaaagcctggcc
tttttcgcctatcgcgagcccaaggcggcgaagcagctgcacatcggggtgatcccgaag
gcggtcgacgaatatctgcaaatgcgcggaaattacgcggcgcaggaacccgacaagaag
ctcggcaaccccgtgcaccacgtccatgtcgcgcgcggcgaggatatgccgagcgccgag
ctgccggtgactttcgggttgctgctcaatctcgtgggcgtcatgggcgccgatgcgtcg
aaggaccagatctggcgctatcttggccaatatgtcgcgggcgcgaatgccgaggcttat
cccgaactcgaccggctgatcgacaatgcgatggcgtataaccgcgattatgtcgcgccg
acgttgaagcgccgcaagcccgcgggcggcgagggcgcggcgctggccgacctcgacacg
aaactggctgcgctgcccgccgatgcctcggccgacgatatccagaacatcgtgtacgag
attggcaagaacgaagcctatggctttgaaagcctgcgcgattggttcaaggcgctgtac
gagaccctgctcgggtcgagcgccggaccgcgcatgggcagctttgtcgcgctgttcggc
gtggagaatacgcggcggctgatcgccgaggctttggcgtag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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