KEGG   Sphingopyxis fribergensis: SKP52_08875
Entry
SKP52_08875       CDS       T03542                                 
Symbol
proS
Name
(GenBank) Proline-tRNA ligase
  KO
K01881  prolyl-tRNA synthetase [EC:6.1.1.15]
Organism
sphk  Sphingopyxis fribergensis
Pathway
sphk00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:sphk00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    SKP52_08875 (proS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:sphk01007]
    SKP52_08875 (proS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sphk03016]
    SKP52_08875 (proS)
Enzymes [BR:sphk01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.15  proline---tRNA ligase
     SKP52_08875 (proS)
Amino acid related enzymes [BR:sphk01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   SKP52_08875 (proS)
Transfer RNA biogenesis [BR:sphk03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    SKP52_08875 (proS)
 Prokaryotic type
    SKP52_08875 (proS)
SSDB
Motif
Pfam: tRNA-synt_2b HGTP_anticodon ProRS-C_1 baeRF_family12
Other DBs
NCBI-ProteinID: AJA08687
UniProt: A0A0A7PLB2
Position
complement(1867822..1869348)
AA seq 508 aa
MVKHALSVTRQADFAAWYQDVIAEADLAEESGVRGCMVIKPWGYGIWERIQTIMDAGIKD
MGVQNCYFPLFIPLSFFEKEADHVDGFAKEMAVVTHHRLIQDGKGKLIPDPEAKLEEPLI
VRPTSETVIGAAMSRWVQSWRDLPLRVNQWANVVRWEMRTRMFLRTAEFLWQEGHSAHDS
KEDAVAETMRALELYRAVAEEALALPVIAGEKPENERFPGAAATYSIEAMMQDGKALQAG
TSHYLGTGFAEAANIRFQDKDGGHSLCHTVSWGFSTRTIGAVIMTHGDDDGLRCPPRIAP
HQVVIVPMLRDNEEDQAILDYCASLQAELKALDAFREPLRVHLDAGANKAQTKRWGWVKK
GAPIIVEIGPRDVASGNVAVIRRDRLYKDDGKLNSAFIPRGDFVAAAVATLGEIQDNLYA
EAKERLHANIRRDVTDLAAHYAGDAKFVGWVEVQWSRPTGAVLDGIVEQLKALKLTMRNT
PLDAAPADGACFFTGKPAVERVLIGRTY
NT seq 1527 nt   +upstreamnt  +downstreamnt
atggtcaaacatgcgctcagcgtaacccggcaggccgatttcgcggcctggtatcaggat
gtcattgccgaagccgacctcgccgaggaatcgggcgtgcgcggctgcatggtcatcaag
ccgtggggctatggcatatgggagcgcatccagacgatcatggacgcgggcatcaaggac
atgggcgtccagaactgctattttccgctgttcatccccttgagcttctttgagaaggaa
gccgaccatgtcgatggtttcgcgaaggaaatggcggtcgtcacgcaccaccgcctgatc
caggacggtaagggcaagctgatccccgacccggaggcgaagctcgaggagccgctgatc
gtccgtccgacatcggaaacggtgatcggcgcggcgatgagccgctgggttcagtcgtgg
cgcgacctgccgttgcgcgtcaaccagtgggccaatgtcgtgcgctgggaaatgcgcacg
cgcatgttcctgcgcaccgccgaattcctgtggcaggaaggccatagcgcgcatgacagc
aaggaagacgcggtcgctgaaacgatgcgcgcgctcgaactctatcgcgcggttgccgaa
gaggcgctcgcgctgccggtgattgcaggcgaaaagcccgagaatgagcgttttccaggc
gccgccgcgacctattcgatcgaggcgatgatgcaggacggcaaagcgctgcaggccggc
acctcgcattatctcggcaccggcttcgccgaagcagcaaacatccgcttccaggacaag
gatggcggccacagcctgtgccacaccgtcagctggggtttttcgacgcgcacgatcggc
gcggtcatcatgacgcatggcgacgacgatggcctgcgatgcccgccgcgcattgcaccg
caccaggtcgtcatcgtgccgatgctgcgcgataatgaggaggatcaggcgatcctcgac
tattgcgcatcgctccaagccgagctgaaagcactcgacgctttccgcgaaccgctgcgc
gtccatctcgacgccggcgccaacaaggcgcagacgaagcgctggggctgggtcaagaag
ggtgcaccgatcatcgtcgaaatcggtccgcgcgatgtcgccagcggcaatgtcgcggtg
atccgccgcgaccggctctacaaggacgatggcaagctcaatagtgcgttcatcccgcgc
ggcgatttcgtcgccgctgcggtcgctacgctcggcgagatccaggacaatctttacgcc
gaggcgaaagagcgccttcacgccaatatccgccgcgacgtgaccgaccttgcagcgcac
tacgccggcgacgccaagttcgttggctgggtcgaggtgcaatggtcgcgcccgaccggc
gcggtcctcgatgggatcgtcgagcagctcaaggctttgaagctgacgatgcgcaacacc
ccgctcgacgccgcgcctgccgacggcgcctgtttcttcaccggcaagcccgccgtcgaa
cgcgtgctcatcggccggacctattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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