KEGG   Sphingopyxis fribergensis: SKP52_14735
Entry
SKP52_14735       CDS       T03542                                 
Symbol
gcvPB
Name
(GenBank) Putative glycine dehydrogenase [decarboxylating] subunit 2
  KO
K00283  glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
Organism
sphk  Sphingopyxis fribergensis
Pathway
sphk00260  Glycine, serine and threonine metabolism
sphk00630  Glyoxylate and dicarboxylate metabolism
sphk00785  Lipoic acid metabolism
sphk01100  Metabolic pathways
sphk01110  Biosynthesis of secondary metabolites
sphk01200  Carbon metabolism
Module
sphk_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sphk00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    SKP52_14735 (gcvPB)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SKP52_14735 (gcvPB)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    SKP52_14735 (gcvPB)
Enzymes [BR:sphk01000]
 1. Oxidoreductases
  1.4  Acting on the CH-NH2 group of donors
   1.4.4  With a disulfide as acceptor
    1.4.4.2  glycine dehydrogenase (aminomethyl-transferring)
     SKP52_14735 (gcvPB)
SSDB
Motif
Pfam: GcvP2_C Aminotran_5 GDC-P Beta_elim_lyase
Other DBs
NCBI-ProteinID: AJA09829
UniProt: A0A0A7PIM9
Position
complement(3147000..3148544)
AA seq 514 aa
MTALNRAGWRPEMNAVGGADDNVTFTGNRALMLEEALIFEIGSTETTGVDFDETAPAADF
GALARTAPIGLPGLSESETVRHYTRLSRQNYAIDLGLFPLGSCTMKHNPRLNEKVARMSG
FADAHPLQPQETVQGAYAVIHELAEWLITLTGMHSVAMSPKAGAHGELCGILCIKAALEA
RGEDRRVILVPESAHGTNPATAAFAGFTVEDIPATEAGRVNLEALKARLGPDVAGVMITN
PNTCGLFERDMKAISDAVHAVGGYVYCDGANFNAIVGRVRPGDLGVDAMHINLHKTFSTP
HGGGGPGSGPVVLSEALAPFAPLPFVTKQGDGFRLIEEESAGEDHPQTFGRMTAFHGQMG
MFTRALTYILSHGADGLKQVAEDAVLNANYVLRSLEGVLDAPFAASGPCMHEALFSDKGL
AEGFSTLDIAKGLIDEGYHPMTVYFPLVVHGAMLVEPTETESKAALDQFIGALRSIAMRA
KNGDPALKSAPHFAPRGRLDETLAARKPVLAWED
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgaccgcgctcaaccgcgccggctggcgccccgaaatgaatgccgtcggcggcgccgac
gacaatgtcactttcaccggcaaccgcgcgctgatgctggaggaagccctgatcttcgag
atcggttcgaccgaaaccaccggcgtcgatttcgacgaaacggcgcccgccgccgacttt
ggcgcgctcgcgcgcaccgcgccgatcggcctgccggggctcagcgaatccgaaacggtg
cgccattacacgcgcctgtcgcggcagaattacgcgatcgacctcggcctcttcccgctc
ggttcgtgcacgatgaagcacaatccgcgcctcaacgaaaaggtcgcgcgcatgtccggc
ttcgccgacgcgcacccgttgcagccgcaggaaaccgtccagggcgcctatgcggtgatc
cacgagcttgccgaatggctgatcacgctgacgggcatgcacagcgtcgcgatgtcgccc
aaggcgggcgcgcatggcgagctttgcggcattctctgcatcaaggcggcgctcgaagcg
cgcggcgaggaccgccgcgtgatcctcgtccccgaaagcgcgcacggtaccaaccccgcg
accgctgcctttgcgggcttcacggtcgaggatattccggcgaccgaggctggccgcgtc
aacctcgaggcgctgaaggcgcgcctcggccccgacgtcgcgggggtgatgatcaccaac
cccaacacctgcggcctgttcgagcgcgatatgaaggcgatttcggatgcggtgcatgcg
gtgggcggttatgtctattgcgacggcgccaacttcaacgcgattgtcggccgcgtgcgt
cccggcgacctgggcgtcgatgcgatgcacatcaacctccacaagaccttctcgaccccg
cacggcggcggcggccccggttcgggcccggtcgtgctgtccgaggcgctcgcacccttc
gcgccgctgcctttcgtcacgaagcagggcgatggcttccgcctgatcgaggaagaaagc
gcgggggaggatcatccgcagaccttcgggcgcatgaccgccttccatggccagatgggc
atgttcactcgcgcgctgacctatatcctcagccatggcgccgacggcctcaaacaggtc
gccgaggacgcggtgctcaacgccaattatgtgctgcgcagcctcgagggcgtgctcgat
gcgcccttcgcggcatcgggcccgtgcatgcacgaagcgctgttcagcgacaaaggcctc
gccgaaggcttctcgacgctcgacatcgcgaaggggctgatcgacgagggctatcacccg
atgacggtctatttcccgctcgtcgtccatggcgcgatgctcgtcgagccgaccgagacc
gaaagcaaggcggcgctcgaccagtttatcggtgcgctgcgcagtatcgcaatgcgcgcg
aagaacggcgacccggcgctcaagtcggcgccgcatttcgcaccgcgcggacggctcgac
gagacgctcgcggcgcgcaagcccgtgctggcctgggaggactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (6)   
   KEGG MODULE (1)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (31)   

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