KEGG T04602: LPB140

Sphingorhabdus lutea: LPB140_03610

Entry

LPB140_03610      CDS       T04602

Name

(GenBank) hypothetical protein

K20276

large repetitive protein

Organism

sphl Sphingorhabdus lutea

Pathway

sphl02024

Quorum sensing

Brite

KEGG Orthology (KO) [BR:sphl00001]
09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LPB140_03610

SSDB

Motif

Pfam:

SdrD_B He_PIG DUF11

Other DBs

NCBI-ProteinID:

APG62053

UniProt:

A0A1L3JAF7

Position

748215..757244

AA seq 3009 aa
MKNINYESTRLNIRSRAMLVSALPFVALAMANQASAQNAVNSANVAVPSGTTDPDTSNNN
ATDSDIIYAVIVASNDSVSNVNGASGATAVVNAFTSDSINGVAASDANAVLSVASGSSVP
AGLSFDPATGNVNVAAGTPAGTYSFDYQICEKLNPTNCTTATISVGVVAAPISADADSVN
GVNGASGASGVVDVLDGDMLNGAAATLSTVDISVTTPATPISGGPVPTLNPATGLVDVPA
GTPAGSYTIEYQICEKLNPTNCASNMVTVDVAASAIVASNDSVSNVNGASGATAVVNAFT
SDSINGVAASDANAVLSVASGSSVPAGLSFDPATGNVNVAAGTPAGTYSFDYQICEKLNP
TNCTTATISVGVVAAPISADADSVNGVNGASGASGVVDVLDGDMLNGAAATLSTVDISVT
TPATPISGGPVPTLNPATGLVDVPAGTPAGSYTIEYQICEKLNPTNCASNMVTVDVAASA
IVASNDSVSNINGASGATAVVNAFTSDSINGVAASDANAILSVASGSSVPAGLSFDPATG
NVNVAAGTPAGTYSFDYQICEKLNPTNCTTATISVGVVAAPISADADSVNGVNGASGASG
VVDVLDGDMLNGAAATLSTVDISVTTPATPISGGPVPTLNPATGLVDVPAGTPAGSYTIE
YQICEKLNPTNCASNMVTVDVAASAIVASNDSVSNVNGASGATAVVNAFTSDSINGVAAS
DANAVLSVASGSSVPAGLSFDPATGNVNVAAGTPAGTYSFDYQICEKLNPTNCTTATISV
GVVAAPISADADSVNGVNGASGASGVVDVLDGDMLNGAAATLSTVDISVTTPATPISGGP
VPTLNPATGLVDVPAGTPAGSYTIEYQICEKLNPTNCASNMVTVDVAASAIVASNDSVSN
INGASGATAVVNAFTSDSINGVAASDANAILSVASGSSVPAGLSFDPATGNVNVAAGTPA
GTYSFDYQICEKLNPTNCTTATISVGVVAAPISADADSVNGVNGASGASGVVDVLDGDML
NGAAATLSTVDISVTTPATPISGGPVPTLNPATGLVDVPAGTPAGSYTIEYQICEKLNPT
NCASNMVTVDVAASAIVASNDSVSNVNGASGATAVVNAFTSDSINGVAASDANAVLSVAS
GSSVPAGLSFDPATGNVNVAAGTPAGTYSFDYQICEKLNPTNCTTATISVGVVAAPISAD
ADSVNGVNGASGASGVVDVLDGDMLNGAAATLSTVDISVTTPATPISGGPVPTLNPATGL
VDVPAGTPAGSYTIEYQICEKLNPTNCASNMVTVDVAASAIVASNDSVSNVNGASGATAV
VNAFTSDSINGVAASDANAVLSVASGSSVPAGLSFDPATGNVNVAAGTPAGTYSFDYQIC
EKLNPTNCTTATISVGVVAAPISADADSVNGVNGASGASGVVDVLDGDMLNGAAATLSTV
DISVTTPATPISGGPVPTLNPATGLVDVPAGTPAGSYTIEYQICEKLNPTNCASNMVTVD
VAASAIVASNDSVSNINGASGATAVVNAFTSDSINGVAASDANAVLSVASGSSVPAGLSF
DPATGNVNVAAGTPAGTYSFDYQICEKLNPTNCTTATISVGVVAAPISADADSVNGVNGA
SGASGVVDVLDGDMLNGAAATLSTVDISVTTPATPISGGPVPTLNPATGLVDVPAGTPAG
SYTIEYQICEKLNPTNCASNMVTVDVAASAIVASNDSVSNVNGASGATAVVNAFTSDSIN
GVAASDANAVLSVASGSSVPAGLSFDPATGNVNVAAGTPAGTYSFDYQICEKLNPTNCTT
ATISVGVVAAPISADADSVNGVNGASGASGVVDVLDGDMLNGAAATLSTVDISVTTPATP
ISGGPVPTLNPATGLVDVPAGTPAGSYTIEYQICEKLNPTNCASNMVTVDVAASAIVASN
DSVSNVNGASGATAVVNAFTSDSINGVAASDANAVLSVASGSSVPAGLSFDPATGNVNVA
AGTPAGTYSFDYQICEKLNPTNCTTATISVGVVAAPISADADSVNGVNGASGASGVVDVL
DGDMLNGAAATLSTVDISVTTPATPISGGPVPTLNPATGLVDVPAGTPAGSYTIEYQICE
KLNPTNCASNMVTVDVAASAIVASNDSVSNINGASGATAVVNAFTSDSINGVAASDANAI
LSVASGSSVPAGLSFDPATGNVNVAAGTPAGTYSFDYQICEKLNPTNCTTATISVGVVAA
PISADADSVNGVNGASGASGVVDVLDGDMLNGAAATLSTVDISVTTPATPISGGPVPTLN
PATGLVDVPAGTPAGSYTIEYQICEKLNPTNCASNMVTVDVAASAIVASNDSVSNINGAS
GATAVVNAFTSDSINGVAASDANAILSVASGSSVPAGLSFDPATGNVNVAAGTPAGTYSF
DYQICEKLNPTNCTTATISVGVVAAPISADADVAPPVRSGIGNPALMNILANDQLNGQPI
NPNDVILSIISGANDPNIILDVNSGQVSVGPEVPAGTYVFEYQICEKLNPTNCATSTYTI
IVDPAISSVEGTVYLDRNGDRALDNGDELRAGWIVEILRNGELLESAITDANGSYRFDNL
LSGGGYVIRFRNPDNNVVYGQLENVELTSNSVVIDQNLPIDPSGVVYNSVTRDPVAGAVA
RLTNANGIALPATCFLDPSQQSQVTGPSGEYRFDIVPGAASQCPVGEAEYVISITPPSGF
TFVSTVLLPQNGAFDPSGQTGPVRISSGPDAPDDANPTYYLRFTLQQGDPDVIYNHIPID
PFLSRLPLIITKSSIKRTVNIGDLVPYEITVRNVENVQRAGVTVVDLLPPGFKYVAGSAT
VDGVLTPVEAANSNRQIEWRGQIIPALSSVKYNLTLTVGAGVTQGTKVNTAFGVDGPSGS
AISNRGSAAVQIVPSSIFDCSEIIGKVFEDRNYNGYQDEGEPGVPYVRLATVNGQLITTD
EFGRYHIACAAVPDARIGSNYVLKLDTRTLPIGWLPTQDNPRSIRLTRGKMGEVNFGVAP
PKQKDEGEE

NT seq 9030 nt +upstreamnt +downstreamnt
atgaaaaacatcaattatgaatccacaagattaaatatccggtcacgcgcaatgctggtc
agtgcgcttccttttgtcgcgcttgccatggctaatcaggcttctgcccaaaatgcggtg
aacagtgcaaatgtcgccgtgcccagtggtacgaccgaccccgacacatccaataataat
gcgactgatagcgatattatttatgccgttattgtggcgagcaatgatagtgtgagcaat
gttaatggtgcatcaggggcaacggcggtggtcaatgcctttacatctgatagcattaat
ggggtggcggcgagcgatgccaatgcggtgttaagcgtggcgagcgggtcaagcgttcca
gcaggattaagctttgatccagccacgggcaatgtgaatgtggcggcgggcacgcccgca
ggcacctatagctttgattatcaaatttgtgaaaagctaaaccccaccaactgcaccacg
gcaacgatcagcgtgggcgttgttgccgcgccgattagcgcggatgcagatagcgtgaac
ggtgttaatggcgcgagcggcgcgtcgggcgttgtcgatgtgctggacggggatatgtta
aacggggcggcggcgacattatccactgttgatattagtgtgacgacaccggccacgcca
atatctggcgggcctgtgccaacgctgaaccctgcaacgggtcttgttgatgtgcctgct
ggcacgccggctggcagctacactattgaatatcaaatttgtgaaaaactaaacccgacc
aattgtgcaagcaatatggtgacggtggatgttgcggccagcgcgattgtggcgagcaat
gatagtgtgagcaatgttaatggtgcatcaggggcaacggcggtggtcaatgcctttaca
tctgatagcattaatggggtggcggcgagcgatgccaatgcggtgttaagcgtggcgagc
gggtcaagcgttccagcaggattaagctttgatccagccacgggcaatgtgaatgtggcg
gcgggcacgcccgcaggcacctatagctttgattatcaaatttgtgaaaagctaaacccc
accaactgcaccacggcaacgatcagcgtgggcgttgttgccgcgccgattagcgcggat
gcagatagcgtgaacggtgttaatggcgcgagcggcgcgtcgggcgttgtcgatgtgctg
gacggggatatgttaaacggggcggcggcgacattatccactgttgatattagtgtgacg
acaccggccacgccaatatctggcgggcctgtgccaacgctgaaccctgcaacgggtctt
gttgatgtgcctgctggcacgccggctggcagctacactattgaatatcaaatttgtgaa
aaactaaacccgaccaattgtgcaagcaatatggtgacggtggatgttgcggccagcgcg
attgtggcgagcaatgatagtgtgagcaatattaatggtgcatcaggggcaacggcggtg
gtcaatgcctttacatctgatagcattaatggggtggcggcgagcgatgccaatgcgata
ttaagcgtggcgagcggctcgagcgttcctgcaggattaagctttgatccagccacgggc
aatgtgaatgtggcggcgggcacgcccgcaggcacctatagctttgattatcaaatttgt
gaaaagctaaaccccaccaactgcaccacggcaacgatcagcgtgggcgttgttgccgcg
ccgattagcgcggatgcagatagcgtgaacggtgttaatggcgcgagcggcgcgtcgggc
gttgtcgatgtgctggacggggatatgttaaacggggcggcggcgacattatccactgtt
gatattagtgtgacgacaccggccacgccaatatctggcgggcctgtgccaacgctgaac
cctgcaacgggtcttgttgatgtgcctgctggcacgccggctggcagctacactattgaa
tatcaaatttgtgaaaaactaaacccgaccaattgtgcaagcaatatggtgacggtggat
gttgcggccagcgcgattgtggcgagcaatgatagtgtgagcaatgttaatggtgcatca
ggggcaacggcggtggtcaatgcctttacatctgatagcattaatggggtggcggcgagc
gatgccaatgcggtgttaagcgtggcgagcgggtccagcgttccagcaggattaagcttt
gatccagccacgggcaatgtgaatgtggcggcgggcacgcccgcaggcacctatagcttt
gattatcaaatttgtgaaaaactaaaccccaccaactgcaccacggcaacaatcagcgtg
ggcgttgttgccgcgccgattagcgcggatgcagatagcgtgaacggtgttaatggcgcg
agcggcgcgtcgggcgttgtcgatgttcttgatggggatatgttaaacggcgcggcggcg
acattatccactgttgatattagtgtgacgacaccggccacgccaatatctggcgggcct
gtgccaacgctgaaccctgcaacgggtcttgttgatgtgcctgctggcacgccagctggc
agctacactattgaatatcaaatttgtgaaaaactaaacccgaccaattgtgcaagcaat
atggtgacggtggatgttgcggccagcgcgattgtggcgagcaatgatagtgtgagcaat
attaatggtgcatcaggggcaacggcggtggtcaatgcctttacatctgatagcattaat
ggggtggcggcgagcgatgccaatgcgatattaagcgtggcgagcggctcgagcgttcca
gcaggattaagctttgatccagccacgggcaatgtgaatgtggcggcgggcacgcccgca
ggcacctatagctttgattatcaaatttgtgaaaagctaaaccccaccaactgcaccacg
gcaacgatcagcgtgggcgttgttgccgcgccgattagcgcggatgcagatagcgtgaac
ggtgttaatggcgcgagcggcgcgtcgggcgttgtcgatgtgctggacggggatatgtta
aacggggcggcggcgacattatccactgttgatattagtgtgacgacaccggccacgcca
atatctggcgggcctgtgccaacgctgaaccctgcaacgggtcttgttgatgtgcctgct
ggcacgccggctggcagctacactattgaatatcaaatttgtgaaaaactaaacccgacc
aattgtgcaagcaatatggtgacggtggatgttgcggccagcgcgattgtggcgagcaat
gatagtgtgagcaatgttaatggtgcatcaggggcaacggcggtggtcaatgcctttaca
tctgatagcattaatggggtggcggcgagcgatgccaatgcggtgttaagcgtggcgagc
gggtcaagcgttccagcaggattaagctttgatccagccacgggcaatgtgaatgtggcg
gcgggcacgcccgcaggcacctatagctttgattatcaaatttgtgaaaagctaaacccc
accaactgcaccacggcaacgatcagcgtgggcgttgttgccgcgccgattagcgcggat
gcagatagcgtgaacggtgttaatggcgcgagcggcgcgtcgggcgttgtcgatgtgctg
gacggggatatgttaaacggggcggcggcgacattatccactgttgatattagtgtgacg
acaccggccacgccaatatctggcgggcctgtgccaacgctgaaccctgcaacgggtctt
gttgatgtgcctgctggcacgccggctggcagctacactattgaatatcaaatttgtgaa
aaactaaacccgaccaattgtgcaagcaatatggtgacggtggatgttgcggccagcgcg
attgtggcgagcaatgatagtgtgagcaatgttaatggtgcatcaggggcaacggcggtg
gtcaatgcctttacatctgatagcattaatggggtggcggcgagcgatgccaatgcggtg
ttaagcgtggcgagcgggtcaagcgttccagcaggattaagctttgatccagccacgggc
aatgtgaatgtggcggcgggcacgcccgcaggcacctatagctttgattatcaaatttgt
gaaaagctaaaccccaccaactgcaccacggcaacgatcagcgtgggcgttgttgccgcg
ccgattagcgcggatgcagatagcgtgaacggtgttaatggcgcgagcggcgcgtcgggc
gttgtcgatgttcttgatggggatatgttaaacggggcggcggcgacattatccactgtt
gatattagtgtgacgacaccggccacgccaatatctggcgggcctgttccaacgctgaac
cctgcaacgggtcttgttgatgtgcctgctggcacgcccgctggcagctacactattgaa
tatcaaatttgtgaaaaactaaacccgaccaattgtgcaagcaatatggtgacggtggat
gttgcggccagcgcgattgtggcgagcaatgatagtgtgagcaatattaatggtgcatca
ggggcaacggcggtggtcaatgcctttacatctgatagcattaatggggtggcggcgagc
gatgccaatgcggtgttaagcgtggcgagcgggtcaagcgttccagcaggattaagcttt
gatccagccacgggcaatgtgaatgtggcggcgggcacgcccgcaggcacctatagcttt
gattatcaaatttgtgaaaagctaaaccccaccaactgcaccacggcaacgatcagcgtg
ggcgttgttgccgcgccgattagcgcggatgcagatagcgtgaacggtgttaatggcgcc
agcggcgcgtcgggcgtggtcgatgttcttgatggggatatgttaaacggcgcggcggcg
acattatccactgttgatattagtgtgacgacaccggccacgccaatatctggcgggcct
gttccaacgctgaaccctgcaacgggtcttgttgatgtgcctgctggcacgccagctggc
agctacactattgaatatcaaatttgtgaaaaactaaacccgaccaattgtgcaagcaat
atggtgacggtggatgttgcggccagcgcgattgtggcgagcaatgatagtgtgagcaat
gttaatggtgcatcaggggcaacggcggtggtcaatgcctttacatctgatagcattaat
ggggtggcggcgagcgatgccaatgcggtgttaagcgtggcgagcgggtcaagcgttcca
gcaggattaagctttgatccagccacgggcaatgtgaatgtggcggcgggcacgcccgca
ggcacctatagctttgattatcaaatttgtgaaaagctaaaccccaccaactgcaccacg
gcaacgatcagcgtgggcgttgttgccgcgccgattagcgcggatgcagatagcgtgaac
ggtgttaatggcgcgagcggcgcgtcgggcgttgtcgatgtgctggacggggatatgtta
aacggggcggcggcgacattatccactgttgatattagtgtgacgacaccggccacgcca
atatctggcgggcctgtgccaacgctgaaccctgcaacgggtcttgttgatgtgcctgct
ggcacgccggctggcagctacactattgaatatcaaatttgtgaaaaactaaacccgacc
aattgtgcaagcaatatggtgacggtggatgttgcggccagcgcgattgtggcgagcaat
gatagtgtgagcaatgttaatggtgcatcaggggcaacggcggtggtcaatgcctttaca
tctgatagcattaatggggtggcggcgagcgatgccaatgcggtgttaagcgtggcgagc
gggtcaagcgttccagcaggattaagctttgatccagccacgggcaatgtgaatgtggcg
gcgggcacgcccgcaggcacctatagctttgattatcaaatttgtgaaaagctaaacccc
accaactgcaccacggcaacgatcagcgtgggcgttgttgccgcgccgattagcgcggat
gcagatagcgtgaacggtgttaatggcgcgagcggcgcgtcgggcgttgtcgatgtgctg
gacggggatatgttaaacggggcggcggcgacattatccactgttgatattagtgtgacg
acaccggccacgccaatatctggcgggcctgtgccaacgctgaaccctgcaacgggtctt
gttgatgtgcctgctggcacgccggctggcagctacactattgaatatcaaatttgtgaa
aaactaaacccgaccaattgtgcaagcaatatggtgacggtggatgttgcggccagcgcg
attgtggcgagcaatgatagtgtgagcaatattaatggtgcatcaggggcaacggcggtg
gtcaatgcctttacatctgatagcattaatggggtggcggcgagcgatgccaatgcgata
ttaagcgtggcgagcggctcgagcgttcctgcaggattaagctttgatccagccacgggc
aatgtgaatgtggcggcgggcacgcccgcaggcacctatagctttgattatcaaatttgt
gaaaaactaaaccccaccaactgcaccacggcaacaatcagcgtgggcgttgttgccgcg
ccgattagcgcggatgcagatagcgtgaacggtgttaatggcgcgagcggcgcgtcgggc
gttgtcgatgtgctggacggggatatgttaaacggcgcggcggcgacattatccactgtt
gatattagtgtgacgacaccggccacgccaatatctggcgggcctgtgccaacgctgaac
cctgcaacgggtcttgttgatgtgcctgctggcacgccagctggcagctacactattgaa
tatcaaatttgtgaaaaactaaacccgaccaattgtgcaagcaatatggtgacggtggat
gttgcggccagcgcgattgtggcgagcaatgatagtgtgagcaatattaatggtgcatca
ggggcaacggcggtggtcaatgcctttacatctgatagcattaatggggtggcggcgagc
gatgccaatgcgatattaagcgtggcgagcggctcgagcgttcctgcaggattaagcttt
gatccagccacgggcaatgtgaatgtggcggcgggcacgcccgcaggcacctatagcttt
gattatcaaatttgtgaaaaactaaaccccaccaactgcaccacggcaacaatcagcgtg
ggcgttgttgccgcgccgattagcgcggatgcagatgtagccccgccggttagatcaggc
ataggtaatccggcattgatgaatatattggcgaatgatcaattaaatggtcagccaatt
aaccccaatgacgtgatattatcaattatttcaggcgcaaatgacccaaatatcattttg
gacgtaaatagcggacaggtttcggttgggccagaagtgccagcgggcacatatgttttt
gaatatcaaatttgtgaaaaattaaaccccaccaactgcgcgacaagcacatataccatt
attgttgatccagcgattagttcggttgagggaacggtatatttggacagaaatggtgac
cgtgcgctcgacaatggtgatgaattgcgcgctggttggattgttgagatattgcgtaat
ggcgagctgttagaatccgcaattaccgatgccaatggttcttatcggtttgacaatctt
ttaagcggcggtggatatgttattcgttttcgcaatcccgataataatgttgtttatggg
caattggagaatgttgagctgacctccaatagcgttgtaatcgatcaaaatttaccgatt
gacccatcaggtgttgtttataatagtgtgacacgtgatccagttgcaggggcggttgcg
cggttaacaaatgcaaatggcattgccttgccagccacatgtttccttgacccatcacag
caaagtcaggtgacagggccaagcggagaatataggttcgatatagttcctggcgctgcg
tcgcaatgcccagtgggtgaggcggaatatgttatttcaattaccccgccatctggtttc
acatttgtatcgacagtattgcttccccaaaatggtgcatttgaccccagtggacagacc
ggacctgtgcgtatttcgtcaggtcccgatgcgcccgatgatgcaaatccaacctattat
ttgcgatttacactgcaacaaggggatcccgatgtgatttataatcatattccgattgat
ccattcctgtctcggttgccgttaataatcacaaaatccagcataaagcgcacggtaaat
attggcgatcttgttccatatgaaataaccgtacgcaatgtggaaaatgtacaaagagcc
ggtgtgactgtagtagatttattgccgccaggatttaaatatgtggctggttctgcaacg
gtagatggtgttttgacccccgtagaggcagccaattccaaccgtcaaattgaatggcgc
ggccaaattattcctgccttatcatcggtaaaatataatttaacattgaccgtgggcgca
ggtgttacacagggcacaaaggtaaataccgcatttggtgttgacggcccatcaggttcg
gccatttcaaatcgtggttcagccgcggttcaaattgtgccaagcagcatttttgattgt
tcagaaattattggtaaggtttttgaagatagaaattataatggctatcaagatgaaggc
gagcctggcgtgccctatgtgcgtttggccaccgttaatggtcaattgattaccaccgat
gaatttgggcgatatcatattgcatgtgccgctgtgccagatgcacgtattggttcaaat
tatgtgttaaaattggacacgcgcactttgcccattgggtggctgccgacacaggataat
ccgcgttcaatccgcctgacccgtggtaaaatgggagaggttaatttcggtgtcgcgccg
ccaaaacaaaaggatgagggggaagaataa

All links

Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

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