KEGG   Sphingorhabdus lutea: LPB140_08465
Entry
LPB140_08465      CDS       T04602                                 
Name
(GenBank) hypothetical protein
  KO
K03500  16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Organism
sphl  Sphingorhabdus lutea
Brite
KEGG Orthology (KO) [BR:sphl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sphl03009]
    LPB140_08465
Enzymes [BR:sphl01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     LPB140_08465
Ribosome biogenesis [BR:sphl03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    LPB140_08465
SSDB
Motif
Pfam: Methyltr_RsmB-F FtsJ Ubie_methyltran Methyltransf_31 Methyltransf_24 Methyltransf_32 Methyltransf_25 Methyltransf_15
Other DBs
NCBI-ProteinID: APG62815
UniProt: A0A1L3JCE7
Position
complement(1790955..1792166)
AA seq 403 aa
MKDSGRVQAAIDLLHEVVLAAKNNGAAAERIIASYFKTRRFIGSKDRRYIRDLVWDCIRL
IGERPVSGRAAMLAMVDAGHVDAALFDGSEYGPAVIKDIEERAAPSILSAGLRQYFASII
LQSDNVEEELSALLGRASLDIRAKNDAVIAQKITENLEQAAPIHNVPNGYRLDNGFNIID
HDLYKNGMVEVQDAGSQMIAHAANARPGMTVLDLCAGAGGKTLAMADAMSEGGLLKGRLI
AADTNRARLQQIPDRAARAGYENIEQRLINPRRELEILGDLTGACDIVMVDAPCSGTGTW
RRQPEGRWRLTPKILSQLTDLQFYLLRLAATLVKPGGAIIYATCSLLEDEGGKQIEGFLQ
SNKNFLPEKIDAALGRPHLNGRILTPFHDACDGFFYSRLRHKG
NT seq 1212 nt   +upstreamnt  +downstreamnt
atgaaagatagcggtagagttcaggcagcgattgatctgctgcatgaagtggttttggcc
gcaaaaaataatggcgcagcggcggagaggattattgcatcctatttcaaaacgcgccgt
ttcatcgggtcaaaggaccgccgatatattcgcgatttggtgtgggattgtatacgttta
attggggagcgtccggtatcgggccgtgcagcgatgcttgccatggtggatgcgggccat
gtggatgcagccttatttgacgggtcggaatatggccctgcggtgattaaggatatagaa
gaacgcgccgcgcccagcatattatccgcaggtttacggcaatattttgcatctatcatc
ctgcaatcggacaatgtggaggaagaattgtctgctcttttggggcgtgcatcattggat
attcgggcaaaaaatgatgcagtcattgcccaaaaaattaccgaaaatttggaacaggct
gcgccaattcataatgtgccaaatggatatcgtttggacaatggttttaacattattgac
catgatttatataaaaatggcatggttgaggttcaggatgcaggaagccagatgatagcc
catgctgccaatgcaaggccaggaatgaccgtgcttgatctttgtgccggggcagggggc
aaaacattagcaatggccgatgccatgagcgaaggcggcttattaaaaggacgtttaatc
gcggccgataccaatagagcaaggctgcagcaaatacccgatcgagctgcgcgggcaggt
tatgaaaatatcgaacaaagattgataaatccgcgccgtgagcttgaaatattgggcgat
ttgacgggcgcatgtgatattgtgatggtcgatgccccgtgcagcggcacgggaacatgg
cgccgccagccagaggggcgttggcgtttaacccccaaaattttaagccagcttaccgat
ttgcaattttatttattgcgattggctgcgactttggtgaagcctggcggggcgataatt
tatgctacatgttcattattagaagatgaaggcggcaagcagatagagggatttttacaa
tcgaataaaaatttcttgccagaaaagattgacgcagcgcttggtaggccgcatttaaat
ggcaggatattgacaccatttcatgatgcttgcgatggatttttctatagccgattgcgc
cataaaggataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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