KEGG   Sphingomonas sp. MM-1: G432_01625
Entry
G432_01625        CDS       T02498                                 
Name
(GenBank) ATP-dependent DNA helicase UvrD
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
sphm  Sphingomonas sp. MM-1
Pathway
sphm03420  Nucleotide excision repair
sphm03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sphm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    G432_01625
   03430 Mismatch repair
    G432_01625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sphm03400]
    G432_01625
Enzymes [BR:sphm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     G432_01625
DNA repair and recombination proteins [BR:sphm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     G432_01625
   MMR (mismatch excision repair)
    Other MMR factors
     G432_01625
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_30 PcrA_UvrD_tudor AAA_12 AAA_11
Other DBs
NCBI-ProteinID: AGH48053
UniProt: M4RZH0
Position
353862..356159
AA seq 765 aa
MNHSPPSLPGALADPASDPPYLRGLNPPQREAVLATEGPVLVLAGAGTGKTAALTARLAH
LVATRLAWPSEILAVTFTNKAAREMKERVGRMLGDAVEGMPWLGTFHAICAKMLRRHAEL
VGLQSNFTILDTDDQLRLMKQIILAENLDEKRWTARALGGLIDRWKNRGWTPDDVDAGES
ELFANGRGQQLYRLYQDRLRAVNTCDFGDLLLHMLVILKTHRDVLEQYQQRFRYIMVDEY
QDTNSAQYLWLRLLAQQRKNICCVGDDDQSIYSWRGAEVANILRFEKDFPGAKIIRLEQN
YRSTPHILAAAGGVIAHNGGRLGKELWTEADVGEKVRVIGVWDGPEEARRVGDEIEAYQR
RGGRLDDVAILVRAQFQTREFEDRFIAIGLPYRIVGGFRFYERAEIRDALAYLRVIHQPA
DDLAFERIVNTPKRGLGDKAVAKVHQLARAEGIPLTLAAARILDTDELTAQARRSLGNLV
GDIARWRDRLNDLPHAELARQMLDESGYTAMLQAERTAEAAGRLENLTELTRAMEEYETL
PAFLEHVSLVMDNDADRESAKVTVMTIHAAKGLEFDTVFLPGWEEGVFPSQRALDEGGIA
SLEEERRLAYVAITRARRQATILHAANRRIYGQWTSSIPSRFVAELPAEHVESETTMSGG
ESLWRAQWSEQADPFHDIGRGTGRGPGWQRAAAAGYDPSPKRVVEVRASATSYAAKPRSD
IAIGQRVFHTKFGYGSVAEIEGNKLEIDFELSGRKRVLDSFVNPA
NT seq 2298 nt   +upstreamnt  +downstreamnt
gtgaatcactcgcccccttccctgcccggcgcgctggccgatcccgcttcggatccccct
tatctgcgcggcctcaatccgccccagcgcgaagccgtgctggcaacggaggggccagtg
ctggtgctggccggcgccggcacgggcaagacggcggcgctgaccgcccggctcgcccat
ctggtggcgacgcggctggcctggccgtcggaaatcctggccgtcaccttcaccaacaag
gctgcgcgcgagatgaaggagcgcgtgggccggatgctgggcgatgcggtggaaggcatg
ccgtggctcggcaccttccacgcgatctgcgccaagatgctgcgccgccatgccgagctg
gtcggcctgcaatccaacttcaccattctcgacaccgacgatcagctacggctgatgaag
cagatcatcctcgccgaaaatctggacgagaagcgctggacggcccgcgcgctgggcggg
ctgatcgatcgctggaagaatcgcggctggacgcccgacgatgtcgatgccggcgagagc
gagctgttcgccaacggccgcggccagcagctctaccgcctctaccaggatcggttgcgc
gccgtgaacacctgcgatttcggcgatctgctgctccacatgctcgtcatcctgaagacg
caccgcgacgtgctggagcaatatcagcagcgcttccgctacatcatggtggacgagtat
caggacaccaacagcgcgcagtatctgtggctccggctgctcgctcagcagcgcaagaat
atctgctgcgtgggcgacgacgaccagtcaatctattcctggcgcggggcggaggtggcc
aatatcctgcgcttcgagaaggattttcccggcgcgaagatcatccggctggaacagaat
tatcgctccacgccccacatcctcgcggccgccggcggcgtgatcgcccataatggcggg
cggctaggcaaggaattgtggaccgaggccgacgtgggcgagaaggtccgcgtcatcggc
gtgtgggacgggccggaggaagcccgccgcgtgggcgacgagatcgaggcatatcagcgc
cggggcggcaggctggacgatgtcgccatcctcgtccgcgcccagttccagacgcgcgag
ttcgaggatcgcttcatcgcgatcggcctgccctatcgcatcgtcggcggcttccgcttc
tacgagcgcgccgagatacgcgacgcgctcgcctatctacgggtgatccaccagccggcg
gacgacctcgccttcgaacgcatcgtcaacacgcccaagcgcgggctgggcgacaaggcc
gtcgccaaggtccaccagctcgcccgcgcggaagggattccgctgacgctggcggccgcg
cgcatcctcgacacggatgagctgaccgcgcaggcgcggcgatcgctgggcaatctcgtc
ggcgatatcgcccgctggcgggatcggctgaacgatctgccccatgccgagctggcgcgt
cagatgctcgacgaatccggctataccgcgatgcttcaggccgaacgcaccgccgaagcc
gccgggcggctggaaaaccttaccgagctgacgcgggcgatggaggaatatgaaaccctc
cccgccttcctggaacatgtcagcctcgtcatggacaatgacgccgatcgcgagagcgcg
aaggtgacggtgatgacgatccacgccgccaaggggctggaattcgacaccgtcttcctg
cccggctgggaagaaggcgtcttcccgtcgcagcgcgcgctcgacgaaggcggcatcgcc
agcctcgaggaggagcgccgcctcgcttatgtcgcgatcacccgcgcgcggcggcaggcg
accatcctccacgccgccaaccggcgcatctacgggcaatggacctcctccatcccatcg
cgcttcgtggcggagctgccggccgagcatgtcgaaagcgaaacgacgatgagcggcggc
gaaagcctgtggcgggcgcaatggtccgaacaggccgatccgttccacgatatcgggcgc
ggtaccggacgcgggccggggtggcagcgcgcggccgccgccggctacgatccgtcgccc
aagcgcgtggtcgaggtgcgggcctccgccacctcctacgccgccaagccgcgatcggat
atcgccatcggccagcgcgtattccacaccaagttcggctacggatcggtcgccgagata
gaaggcaacaagctggagatcgatttcgagctttcgggccgcaagcgcgtgctggacagc
ttcgtcaatccggcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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