KEGG   Sphingopyxis sp. 113P3: LH20_01930
Entry
LH20_01930        CDS       T04069                                 
Name
(GenBank) conjugal transfer protein TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
sphp  Sphingopyxis sp. 113P3
Pathway
sphp02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sphp00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LH20_01930
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sphp02044]
    LH20_01930
Enzymes [BR:sphp01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     LH20_01930
Secretion system [BR:sphp02044]
 Type IV secretion system
  Trb secretion system protein
   LH20_01930
SSDB
Motif
Pfam: T2SSE Zeta_toxin TrwB_AAD_bind FtsK_SpoIIIE DEAD AAA_16 AAA_28 nSTAND3 AAA_19 MMR_HSR1 CbiA ABC_ATPase MoCF_biosynth GTP_EFTU AAA_7 AAA_22 ATPase Septin Sigma54_activat DUF815 CLP1_P AAA_2 ResIII
Other DBs
NCBI-ProteinID: ALC10702
UniProt: A0A0M4CPP8
Position
430708..431691
AA seq 327 aa
MTTSHQKPEAIARGARMLRTALGPAIARFLEDPAVVEVMLNPDGRIWIDRLSEGLSDTGE
RLSAADGERIVRLVAHHVGAEVHARSPRVSAELPETGERFEGLLPPVVAAPAFAIRKPAV
AVFTLNDYVAAGIMSPDQAVTLREAVAARANILVAGGTSTGKTTLTNALLAEVAKTQDRV
VIIEDTRELQCAAPNLVAMRTKDGIATLSDLVRSSLRLRPDRIPIGEVRGSEALDLLKAW
GTGHPGGIGTIHAGTGIGALRRLEQLIQEAVVTVPRALIAETIDLVAVLAGRGSARRLAE
LARVGGLGSDGDYRISPATPTNAGDPS
NT seq 984 nt   +upstreamnt  +downstreamnt
atgacgaccagccatcaaaaaccggaagccatcgctcgcggcgcgcggatgctgcgcacg
gcgctcggtcccgccatcgcgcgcttcctggaagaccctgccgtcgtcgaggtgatgctg
aacccggacgggcgcatctggatcgaccgtctttccgaaggactttccgatacgggcgaa
aggctgtcagccgctgacggcgaacgcatcgtgcgcctggtcgcccatcatgtcggcgcg
gaggttcatgcgcgcagcccccgcgtctcggccgaactgcccgagacaggagagcggttc
gaggggcttttgccccctgtggtggcggcgccggccttcgccatacgcaaacccgccgtc
gccgtcttcaccctcaacgattacgtcgccgctggaatcatgtcgccggatcaagccgtg
acgttgcgcgaagctgtcgcggcgcgcgccaacatcctcgtcgcgggcggcacctccacc
ggcaagaccacgctcaccaacgcgctgctggccgaagtggcaaagacgcaggatcgcgtc
gtcatcatcgaggacacccgcgagctgcaatgcgccgctcccaatctggtggcgatgcgc
acgaaggatggcatcgccacgctttccgatctggttcggtcctcgctgcgtctgcgcccg
gatcgtatccccatcggcgaggtgcgcggatcggaagcgctcgacctcctcaaagcgtgg
ggaacggggcatcccggcggcatcggcacgatccacgccggcaccggcatcggcgcgctc
cgtcgccttgaacagctcatccaggaggccgtcgtcaccgtcccgcgcgcgctgatcgcc
gagaccatcgacctcgtggccgtcctcgccggccgcggctccgcgcgccggctcgccgaa
ctcgcccgtgtcggagggcttggctcggacggggattaccgcatcagccctgcaaccccc
accaatgctggagacccttcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (23)   
   Pfam (23)   
All databases (33)   

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