KEGG   Sphingopyxis sp. 113P3: LH20_13565
Entry
LH20_13565        CDS       T04069                                 
Name
(GenBank) polynucleotide adenylyltransferase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
sphp  Sphingopyxis sp. 113P3
Pathway
sphp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sphp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LH20_13565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sphp03019]
    LH20_13565
Enzymes [BR:sphp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     LH20_13565
Messenger RNA biogenesis [BR:sphp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     LH20_13565
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd tRNA_NucTran2_2 DUF434
Other DBs
NCBI-ProteinID: ALC12979
UniProt: A0A0M3QDM9
Position
complement(2718699..2719907)
AA seq 402 aa
MTRLPDAEWRQRPGLARIVAALAADGGAVKVVGGAVRDTLLALPVTDVDLATPLRPDEVT
ARLTAANIKVIPTGIAHGTVTAIASGDRHEITTLRRDVATDGRRATVAFADDWREDAARR
DFTINALYADPATGEVDDWFGGLADLEAGRVAFIGDAATRIAEDHLRILRFYRFAARFGT
GDLDPASHAAVVAARHSLKSLSRERVADELMKILALPDPRPIAGRMADDGIFAVIVPELD
RAFAVALDRLITNESASCSPPAPLRRLSALLPADAQTAETVASRLRLSTRQRKHLAAVAA
HRDDRARPARRLAYEIGVDAARDVHLLGSLDVAEVQSLEGWSPPVLPIKGGDIIARGVTA
GPEVARVLRAVEAAWVAEDFPGAVRARELADQMIGRASDSRQ
NT seq 1209 nt   +upstreamnt  +downstreamnt
gtgacccggctgcccgacgccgaatggcgacagaggcccggccttgcccgcatcgtggca
gcgcttgcagccgatggcggcgcggtcaaggtcgtcggcggcgcggtgcgcgatacgctg
cttgcgcttccggtgacggacgtcgatcttgcgacgccgctgcgtcccgacgaggtcacc
gcgcggctgactgccgccaacatcaaggtcatccccaccggcattgcgcacggaaccgtg
accgcaatcgcaagcggcgatcggcacgagatcacgacgctccgccgcgacgtcgcgacc
gacgggcggcgcgcgacggtcgcttttgctgacgactggcgggaggatgcggcgcgccgc
gacttcacgatcaatgcgctttatgccgacccggcgacgggagaggtggacgactggttc
ggcgggctcgccgaccttgaggcaggccgcgttgccttcatcggcgacgctgcgacccgg
atcgccgaggaccatcttcgcatcctgcgcttttaccgcttcgccgcgcggttcgggacc
ggcgacctcgaccccgcgagccacgccgcggtggtcgccgcgcgccactcgctcaagagc
ctctcacgcgagcgcgtcgccgacgagctcatgaagatcctcgcgcttcccgatccgcgc
cccatcgccggccgaatggcggacgatggtattttcgcggtgattgtacccgagcttgat
cgagccttcgccgtagcgctggaccgcctcatcacgaacgagagcgcgagctgttcgccg
cccgccccgcttcgccggctgtcggcgcttctcccggccgacgcgcaaaccgccgagacc
gtggcgagccggctgcgcctctcgacgcgccagcgaaagcacctggccgcggtcgctgcg
caccgcgacgacagggcgcgcccggcgcgccggcttgcctatgagatcggcgtggacgct
gcgcgcgatgtccatctcctcggcagcctcgacgtcgccgaggtgcaaagccttgaaggc
tggtcgccccccgtgctgccgatcaagggcggtgacatcattgcgcgcggcgtgacagcg
ggtccggaggtggcgcgcgtcctccgcgcggtcgaggcggcctgggtcgcggaagatttt
ccaggtgcggtgcgcgcgcgcgaacttgctgatcagatgatcggccgcgcgagcgattcg
cgccaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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