KEGG   Sphingopyxis sp. 113P3: LH20_21590
Entry
LH20_21590        CDS       T04069                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
sphp  Sphingopyxis sp. 113P3
Brite
KEGG Orthology (KO) [BR:sphp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sphp03032]
    LH20_21590
   03400 DNA repair and recombination proteins [BR:sphp03400]
    LH20_21590
Enzymes [BR:sphp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     LH20_21590
DNA replication proteins [BR:sphp03032]
 Prokaryotic type
  DNA Topoisomerases
   LH20_21590
DNA repair and recombination proteins [BR:sphp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      LH20_21590
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook GyrB_insert HATPase_c_3
Other DBs
NCBI-ProteinID: ALC14563
UniProt: A0A0M3QEL5
Position
complement(4374499..4377045)
AA seq 848 aa
MTDTPENPAPEGGAKQPNANAYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEV
SDNAIDEALAGHCDLVLITLNSDGSVSVEDNGRGIPTGIHAEEGISAAEVIMTQLHAGGK
FENTSDDNAYKVSGGLHGVGVSVVNALSEWLELTIWRDGEEHWMRFEHGDSVAPLVVRGP
APAGKKGTRVTFLASTETFKNVTEFDFEKLEHRYRELAFLNSGVRIKLVDARSTEHVVHD
LFYEGGIAAFVKWLDRNKTPLLPDPIAISSERDGIGIDVALEWNDSYYENVLCFTNNIPQ
RDGGTHLAAFRAALTRTLNGYGEKSGLLKKEKVSLTGEDMREGLTAIVSVKLPDPKFSSQ
TKDKLVSSEVRQPLESLMADRMTEWLEENPSHAKTVIQKIVDAAAAREAARKARELTRRK
GAMDIASLPGKLADCQERDPAKCELFLVEGDSAGGSAKQGRDRHVQAILPLKGKILNVER
ARFDRIISSKEVGTLIQALGTGIRDEFTIDKLRYHKIVIMTDADVDGAHIRTLLLTFFYR
QMPEIIENGHLYIAQPPLYKVSKGRSEVYLKDDNALENYLVDAGIDALLLESAGGARSGQ
DLRGLIDHARRLRALMRYVPRTLDHGLVEALALTGALDPDLDAAGRHSAAETAARWLRAA
ERAQTGGNEATWTVEAVEGGGYTLERRWRGVSDHHAVDAAFLASQEARRLHKLAGEQTET
YATPARLVKAGGAAALEADPADEESEGETTASPAAKANPVTRPSELLEAIFAHSRKGLSI
SRYKGLGEMNAEQLWETTLDPANRSLLRVEAEQADIAHEIFERLMGDEVEPRRDFIQTNA
LSVANLDV
NT seq 2547 nt   +upstreamnt  +downstreamnt
atgacggacacccctgagaatccagcgccggaaggcggcgccaagcagcccaatgccaac
gcctatggcgccgattcgatcaaggtgctcaagggccttgacgcggtgcgcaagcgcccg
ggcatgtatatcggtgacaccgacgacgggtcgggtctgcatcacatggtgttcgaggtg
tcggacaacgcgatcgacgaagcgctggctggacattgcgaccttgttctcatcaccttg
aacagcgacggatcggtcagcgtcgaggataacggccgcggaatcccgaccggcatccac
gccgaggaaggcatttccgcagccgaggtcattatgacccagctccacgccggcggaaag
ttcgagaatacgagcgacgacaacgcgtacaaggtgtcgggtggccttcacggcgtcggc
gtatcggtggtgaacgcgctgtcggaatggttggaacttacaatctggcgcgacggcgaa
gaacattggatgcgcttcgagcatggcgattcggtcgcaccgcttgtggttcgcggccca
gcgcccgccggaaagaagggaacgcgcgtcaccttcctcgcctcgacagagactttcaag
aatgtcaccgaatttgatttcgagaagctcgagcaccgctatcgcgaactcgccttcctg
aattcgggcgtccgcatcaagctggtcgatgcccgcagcaccgaacatgtcgtccatgac
ctgttttatgaagggggcatcgcggccttcgtcaaatggctcgaccgcaacaagacgccg
ctgctgcccgatccgatcgcaatcagcagcgagcgcgacggaatcggcatcgacgtcgct
ctcgagtggaacgacagctattatgagaatgtcctctgtttcaccaacaacatcccgcaa
cgcgacggcggcacccacctcgccgcctttcgcgcggcgctgacgcgcaccctcaacggc
tatggcgaaaagtcggggctcttgaagaaagaaaaggtcagcctgaccggtgaggatatg
cgcgaaggtctgaccgcgattgtctcggtcaagctgcccgaccccaaattcagctcgcaa
acgaaggacaagctcgtttcttcggaagtccgccagccgctggaaagcctgatggccgac
cggatgaccgaatggctggaggaaaacccctcgcatgccaagacggtgatccagaagatc
gttgatgctgccgcggcgcgcgaagcggcgcgcaaggcgcgtgagctcacccggcgaaaa
ggggcgatggatatcgcaagcctgcctggcaagctcgctgattgccaggaacgcgatcct
gcaaaatgcgagctgttcctggttgagggtgactcggcaggcgggtcggccaaacagggc
cgcgaccgacatgtgcaggcgatcctgccgctcaagggcaagatcctgaacgtcgagcgc
gcacgcttcgatcgcatcatctcgtccaaggaagtcggcacgctgatccaggcgctaggc
accgggattcgcgacgagttcacgatcgacaagctgcgttaccacaagattgtgatcatg
accgacgcggacgtcgacggcgcccatatccgcacgctgctgctgaccttcttctatcgc
cagatgccggagatcatcgagaacggtcatctctacatcgcccagcccccactctacaaa
gtctcgaaaggacgcagcgaggtctatctcaaggatgacaatgcgctggagaattatctg
gtcgatgccggtatcgacgccctgctgctcgaaagcgcgggcggggcgcgatccggccag
gatcttcgcggattgatcgaccacgcgcggcgattgcgggccttgatgcgctatgttccg
cgcacgctcgaccacggtcttgtcgaggcgctggcgttgaccggcgcgctcgatcctgat
ctcgacgctgcggggcgccatagcgccgcggagaccgcggcgcggtggctacgcgccgcc
gagcgcgcgcagacgggaggcaatgaggcgacgtggaccgtcgaagccgtcgaaggcggg
gggtatacgctcgaacgccgctggcgcggggtcagcgaccatcacgccgtcgatgccgct
ttccttgcgagccaggaggcgcgtcgtcttcacaagctcgcgggcgaacagactgaaacc
tatgcgacccccgcgcggctcgtaaaggccggcggggcggctgcactcgaggccgatccc
gccgacgaagagagtgaaggcgaaaccaccgcgtcgccggctgcgaaggcgaacccggtc
acccgcccgtccgaactgctcgaggcgatcttcgcgcatagtcgcaagggccttagcatc
agccgctacaaagggctgggcgagatgaacgccgagcaactgtgggaaaccacgctcgat
cccgccaaccgctcgctattgcgggtcgaggccgagcaggccgatatcgcccatgaaatc
ttcgagcgattgatgggcgacgaggtcgagccgcggcgcgatttcatccagacgaatgcg
ctgtcggtcgccaatctcgacgtctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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