KEGG   Sphingopyxis sp. QXT-31: BWQ93_12650
Entry
BWQ93_12650       CDS       T04913                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
sphq  Sphingopyxis sp. QXT-31
Pathway
sphq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sphq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BWQ93_12650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sphq03019]
    BWQ93_12650
   03016 Transfer RNA biogenesis [BR:sphq03016]
    BWQ93_12650
Enzymes [BR:sphq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     BWQ93_12650
Messenger RNA biogenesis [BR:sphq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BWQ93_12650
Transfer RNA biogenesis [BR:sphq03016]
 Prokaryotic type
  tRNA degradation factors
   BWQ93_12650
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 BioW DUF3016
Other DBs
NCBI-ProteinID: APZ99243
UniProt: A0A1P8WYW2
Position
complement(2630566..2632884)
AA seq 772 aa
MFDVKKVSIEWGGETLTLETGKVARQADGAVVATLGETMVLAAVTAAKTVKEGQDFFPLT
VHYQEKYSGAGRIPGGFFKRERGATEKETLVSRLTDRPIRPLFPEGFYNEINVIAQVLSY
DGHNEPDILAMVAASAALTISGVPFMGPIGAARVGYVDGEYILNPTDAQVAEGDLDLVVA
ATYDAVMMVESEANELSEEIMLGAVLFAHDACKEVVKAIVKLAEQAAKDPWDMAEQADLT
AAKDKLKKLIGKDIAAAYKLTDKSARSNALNEARAAAKAAFADAAPQDQMAAGKLMKKLE
AEIVRGAILKDGKRIDGRTTTQIRPIVAETHFLPRAHGSALFTRGETQTIATCTLGTKDS
EQMIDGLNGLSYSNFMLHYNFPPYSVGEVGRFGAPSRRDIGHGKLAWRALHAVLPTKDEF
PYTIRITSDITESNGSSSMASVCGGSLAMMDAGVPIKRPVSGIAMGLILEGKDYAILSDI
LGDEDHLGDMDFKVAGTSEGITTMQMDIKIAGITREIFEAALNQAKEGRAHILGEMAKAL
GEARTELSDYAPRIETMQIDKSKIRDIIGTGGKVIREIVATTGAKVDIDDEGLIKISSSD
PSQIEAARKWISGIVEEAEVGKIYDGKVVNLVDFGAFVNFMGGKDGLVHVSEIANERVEK
VSDVLSEGQEVKVKVLEIDQRGKVRLSMRVVDQETGAELEDTRPPREPRGDRGDRGPRRD
GDRDRGPRRDGGRGDRGPRRDGGGEGRSDRGPRRERNDGPEDQGHVPDFLKD
NT seq 2319 nt   +upstreamnt  +downstreamnt
atgtttgacgtgaaaaaagtatcgatcgagtggggcggtgaaacgctgaccctcgaaacg
ggcaaggttgcccgccaggccgatggcgcggttgtcgcgacgctcggcgaaacgatggtc
ctggccgcggtcaccgccgccaagacggttaaggaagggcaggatttcttcccgctcacc
gtccattatcaggaaaaatattctggcgcaggccgcattcccggcggcttcttcaagcgc
gagcgcggcgcgaccgaaaaggaaacgctggtcagtcgtttgaccgatcgcccgatccgt
ccgctgttccccgagggtttctacaacgaaatcaacgtcattgcccaagttctgagctat
gacggccataacgagcccgacattttggcgatggtcgccgcttcggctgcgctcaccatc
tcgggcgtgcccttcatgggcccgatcggcgccgcgcgcgtcggttatgtcgacggcgaa
tatatcctgaacccgaccgacgcgcaggttgccgaaggcgacctcgaccttgtcgtcgcc
gcgacttacgacgcggtgatgatggtcgaatcggaagccaatgagctgtcggaagagatc
atgctcggcgccgtgctgttcgcgcacgacgcgtgcaaggaagtcgtcaaggcgatcgtc
aagctggctgaacaggctgccaaggatccctgggacatggccgaacaggccgacctgacc
gccgccaaggacaagctcaagaagctgatcggcaaggacatcgccgccgcgtacaagtta
accgacaagtcggcccgctcgaacgcgctgaacgaagcccgcgccgccgccaaggccgcg
ttcgccgacgctgcgccgcaggaccagatggccgcgggcaagctgatgaagaagctcgaa
gccgagatcgtgcgcggcgccatcctgaaggacggcaagcgcatcgacggccgcacgacg
acccagattcgtccgatcgttgccgaaacgcacttcctgccccgcgcgcacgggtcggcg
ctgttcacccgcggcgagacgcagacgatcgcgacctgcaccctgggcaccaaggacagc
gagcagatgatcgacggcctgaatggcctgtcgtactcgaatttcatgctgcactacaac
ttcccgccctattcggtcggcgaagtcggccgcttcggggcgcccagccgccgcgacatc
ggccatggcaagctggcatggcgtgcgctgcacgcggtgctgccgacgaaggacgagttc
ccctatacgatccgcatcaccagcgacatcaccgagtcgaacggctcgtcgtcgatggcg
tcggtctgcggcggttcgctggccatgatggacgccggcgtgccgatcaagcgccccgtc
tcgggcatcgcgatgggcctgatcctcgaaggcaaggattatgcgatcctgtcggacatc
ctgggcgacgaggatcacctcggcgacatggatttcaaggtcgcgggcacgtccgaaggc
atcaccacgatgcagatggacatcaagatcgcgggcatcacgcgcgagattttcgaagcc
gcattgaaccaggccaaggaaggccgtgcgcatatcctgggcgaaatggccaaggcgctg
ggcgaagcccgcaccgagctgtccgattatgcgccgcgcatcgaaacgatgcagatcgac
aagtcgaagatccgcgacatcatcggcaccggcggcaaggtgatccgcgagatcgtcgcg
accaccggcgccaaggtcgacatcgacgacgaaggcctgatcaagatttcgtcgagcgat
ccgtcgcagatcgaagccgcacgcaagtggatcagcggcatcgtcgaggaagccgaagtc
ggaaagatctatgacggcaaggtcgttaacctcgtcgatttcggtgcgttcgtgaatttc
atgggcggcaaggacggtctcgtccacgtcagcgaaatcgccaacgagcgcgtcgagaag
gtctcggacgtcctcagcgaaggccaggaagtcaaggtcaaggtcctcgagatcgaccag
cgcggcaaggttcgcctgtcgatgcgcgtcgtcgaccaggaaaccggcgccgagctggaa
gacacccgcccgccgcgcgaaccccgcggtgatcgtggcgaccgcggcccgcgccgtgac
ggcgaccgcgaccgcggcccccgccgcgacggcggccgcggcgatcgtggcccccgccgc
gacggtggcggcgaaggccgtagcgaccgcggcccgcgccgcgaacgcaacgacggtccg
gaagaccagggccatgtgcccgacttcctgaaggactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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