KEGG   Sphingosinicella sp. BN140058: ETR14_09170
Entry
ETR14_09170       CDS       T05826                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
sphs  Sphingosinicella sp. BN140058
Pathway
sphs02020  Two-component system
sphs02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:sphs00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ETR14_09170 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    ETR14_09170 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sphs03021]
    ETR14_09170 (rpoN)
Transcription machinery [BR:sphs03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ETR14_09170 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR Sigma70_r4 HTH_36 HTH_Crp_2 HTH_38 HTH_23 Xre-like-HTH Phage_CII
Other DBs
NCBI-ProteinID: QAY76649
UniProt: A0A4P6FP98
Position
complement(2036292..2037818)
AA seq 508 aa
MALGPRLDLRQSQSLVMTPQLQQAIRLLALSNLEIESFIAEELDKNPLLESSAGPDDGPD
SETAEPPTAERDEPATVDELVVSGSGEAALDIDVNDENLHQDSSADRIGMDGGLGLDGIG
GGSGEIGDGPDFDSFATGDLSLHEHLVAQAGERLSGGDLLIARAIIEQIEETGYFFASLL
DIAHRLGAPLGDVERVLAIVQSFDPPGVAARSLSECLALQAKDADRYDPAMARLIDNLDY
LAKGNLGALRRICGVDDEDLGDMIRELRAYDPKPGCRFGHSERVEGVVADVFVGRRGGGW
AIELNGATLPRLLINRAYYLELSDGAQDRQSKAWLSECLASANWLMKALDQRARTIIKVA
TEIVKHQDGFFRHGVAHLRPLTLRTIAEAIGMHESTVSRVTSNKYLSCDRGLFELKYFFT
SGIQSADGGDAVSAEAVKSHLKALIAAESADAILSDDQLVELLRAKGFDIARRTVAKYRE
AVGIGSSVQRRRQKALGAERPPQASGWR
NT seq 1527 nt   +upstreamnt  +downstreamnt
atggcgctcgggccgcgcctcgatctcaggcagagccaatcgctggtgatgacgccccag
ctgcagcaggccattcgcctgctggcgctgtccaatctcgagatcgagagcttcatcgcc
gaggaactcgacaagaatccgctgctcgaaagcagtgccggtccggacgatggccccgat
agcgaaaccgccgagccgccgacggcggagcgggacgagcccgcaacggtcgacgagctg
gtcgtatcgggcagcggcgaggccgcactcgacatcgacgtcaacgatgaaaatctgcat
caggacagctcggccgatcggatcggaatggacggcggccttggtctcgacgggatcggc
ggcggctccggcgaaatcggggatgggccggatttcgacagcttcgcgaccggcgatctg
tcgctgcacgagcatctggtcgcccaggcgggggagcgtctttccggcggcgacctcctc
atcgcacgggcgatcatcgagcagatcgaggaaactggttattttttcgcctcgttgctc
gacatcgcccatcggctcggtgctccgctcggcgatgtcgagcgggtgctcgccatcgtc
cagagcttcgacccgccgggcgtggcggcgcgctcactttccgaatgcctcgcgttgcag
gccaaggacgccgatcgctacgatccggcgatggctcggctgatcgacaatctcgattat
ctggcaaagggcaatttgggcgcgctgcggcggatctgcggagtcgacgacgaggatttg
ggcgacatgatccgcgagctgcgggcctacgatcccaagccgggttgccgcttcggccac
agcgagcgggtcgaaggggtggtggcggacgtgttcgtcggccgccgcggcggcggctgg
gcgatcgagctcaatggcgccacgctgccgcggctgctgatcaaccgcgcttattatctc
gaattgtccgacggcgcccaggatcggcagtccaaggcctggttgtccgaatgcttggcc
agcgccaactggctgatgaaggcgctcgatcagcgcgcaagaacgatcatcaaggtcgcc
accgagatcgtcaagcaccaggacggtttcttccggcatggcgtcgcccatttgcgaccg
ctgacgttgcggaccatcgcagaagcgatcggaatgcacgaatcgacggtaagcagggtc
acgtcgaacaaatacctctcctgcgaccgcggcctgttcgaactgaaatatttcttcacc
agcgggattcagagtgccgacggtggcgatgcggtctctgccgaagcggtgaaaagccat
ttgaaggcgctgatcgccgccgagagcgcggacgccatcctgtcggacgaccagctcgtc
gagctgctgcgtgcgaaagggttcgacatcgcccgccgcaccgtcgccaaatatcgggag
gcggtgggcatcggctcctcggtgcagcgccgccgccagaaggcgctcggcgccgagcga
ccgccgcaggcgagtggctggcgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (19)   

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