KEGG   Sphingosinicella sp. BN140058: ETR14_16205
Entry
ETR14_16205       CDS       T05826                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sphs  Sphingosinicella sp. BN140058
Pathway
sphs03410  Base excision repair
sphs03430  Mismatch repair
sphs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sphs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    ETR14_16205 (recJ)
   03430 Mismatch repair
    ETR14_16205 (recJ)
   03440 Homologous recombination
    ETR14_16205 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sphs03400]
    ETR14_16205 (recJ)
DNA repair and recombination proteins [BR:sphs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     ETR14_16205 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     ETR14_16205 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      ETR14_16205 (recJ)
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB VEK-30
Other DBs
NCBI-ProteinID: QAY79941
UniProt: A0A4V0YIZ6
Position
3628912..3630684
AA seq 590 aa
MASKLVCGVSRSILGQPWQWRGAAADGFDAGFQADSLVDQLLMARGVVRDELDRHRTPTI
RGFMPDPSIFRDMDAAAERLADALQARQKITIFGDYDVDGATSAALLVRLLRDLGGDPGA
YIPDRLMEGYGPSGEALVRLGREGAELIVTVDCGAQAFAALDMARAAGVEVIVVDHHKCA
SRLPVAHALVNPNRLDEADDAAAHGHLAAVGVCFLLGAALIRVLRARGAFAARPEPKLID
LLDLVALGTVADVAQLKGLNRAFVTQGLKVMAQRRNVGLAALIDASRLAKPPTCTDLGYA
LGPRINAGGRVGKSDLGVRLLTTEDPEEARGIAAELDRLNEERRAIELMVCEAAEQICQA
KANRAVAVVAGEGWHPGVIGIVAGRLKEKIGRPAIVIAIGEDGTGKGSGRSISGVDLGAA
VLAAKDSGLLVAGGGHAMACGVTIAADRIDALADFLEDRLAGDVARAVDGRALKLDAVLA
PGGVCPDLCDALEQGGPYGAGWPAPRVAAGPVRIVKADVVGNNHLRLVVAGDDGRRIKAI
AFRMADSELGQQMLAAPAHRKLWIAGRIKRDEWGDRIAAEMHLEDAAWAD
NT seq 1773 nt   +upstreamnt  +downstreamnt
atggcctccaaactcgtctgcggcgtctcccgctccatcctcggccaaccctggcagtgg
cgcggggcggcggcggacgggttcgacgccggctttcaggccgacagccttgtcgaccag
ttgctgatggcgcgcggcgtcgtccgcgacgagctcgaccgccaccgcacgccgaccatc
cgcggcttcatgcccgatccgtcgatcttccgcgacatggacgccgccgccgagcggctc
gccgacgcgctccaagcccggcagaagatcaccatcttcggcgactacgacgtcgacggg
gcaacctcggcggccttgctggtgcgcctgctgcgcgatctcggcggcgatccaggcgcc
tacatccccgatcgtctgatggaaggctatggcccctcgggcgaggctctggtgcggctc
ggccgcgagggcgccgagctgatcgtcaccgtcgattgcggcgcgcaggcgttcgcggcg
ctcgacatggcgcgcgccgccggggtggaagtgatcgtggtcgatcaccacaaatgtgcg
agccggcttccagtcgcccatgctctggtcaaccccaaccgcctcgacgaggccgatgat
gccgccgcgcacggccatctcgccgccgtgggcgtctgcttcctgctcggtgccgcgctg
attcgggtgctccgcgcccgcggcgccttcgcggcgcgtcccgagccgaagctgatcgat
ctgctcgatctggtcgcgctcggcaccgtcgccgacgtggcccaattgaagggtctcaac
cgcgccttcgtcacccaggggctgaaggtgatggcacagcgccggaatgtcggccttgcc
gcgctgatcgacgcctcccgcctcgccaagccaccgacctgcaccgacctcggctacgcg
ctgggcccgcggatcaatgccggtggccgcgtcggcaagtccgatctcggcgtgcgtctg
cttaccaccgaggatcccgaggaggcgcgggggatcgccgccgagctcgatcgcctcaac
gaggaacggcgcgcgatcgagctgatggtgtgcgaggccgccgagcagatctgccaggcg
aaggccaatcgtgccgtcgcggtggtcgcgggggaagggtggcatcccggcgtgatcggc
atcgtcgccggacgcctcaaggagaagatcggccggccggcaatcgtcatcgcgatcggc
gaggacggcaccggcaagggctcgggccgctccatctccggcgtcgatctcggcgccgcc
gtgctcgccgccaaggacagcggcctgctcgtcgccggcggtggccatgcgatggcgtgc
ggggtgacgatcgccgccgaccggatcgatgccctcgccgatttcctcgaggatcgtctc
gccggcgacgtcgcccgcgccgtggatggccgggcgctgaagctcgacgccgtgctcgcg
cccggcggcgtttgtcccgatctatgcgacgcactggaacagggtgggccttatggcgcc
ggctggccggcaccgcgggtcgccgccggtccggtgcggatcgtcaaagcggatgtcgtc
ggcaacaaccatctccgcctcgtcgtcgccggtgacgatggccgccggatcaaggcgatc
gcattccggatggccgacagcgaactcggccagcagatgctggcggcaccggcgcaccgc
aagctgtggatcgcgggcaggatcaagcgcgacgaatggggcgaccgcatcgccgccgaa
atgcacctcgaagacgccgcctgggcggattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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