KEGG   Sphingobium sp. TKS: K426_06625
Entry
K426_06625        CDS       T04965                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
spht  Sphingobium sp. TKS
Pathway
spht03030  DNA replication
spht03410  Base excision repair
spht03420  Nucleotide excision repair
spht03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:spht00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    K426_06625
   03410 Base excision repair
    K426_06625
   03420 Nucleotide excision repair
    K426_06625
   03440 Homologous recombination
    K426_06625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spht03032]
    K426_06625
   03400 DNA repair and recombination proteins [BR:spht03400]
    K426_06625
Enzymes [BR:spht01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     K426_06625
DNA replication proteins [BR:spht03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     K426_06625
DNA repair and recombination proteins [BR:spht03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     K426_06625
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     K426_06625
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 HHH_5 DprA_N Ribosomal_60s HHH_2 HAMP_N3 HHH Transposase_20 IMS_HHH
Other DBs
NCBI-ProteinID: AMK22271
UniProt: A0A126RJ32
Position
1:complement(1302034..1304820)
AA seq 928 aa
MPQNHLYLVDGSGYIFRAYHQLPPLTNKHGQPVGAVYGYTTMLWKLADELGKAEGPTHLA
VILDKGSHTFRNDMYDQYKANRPPAPEDLVPQFPMIRDATRAFSLPCIEEAGFEADDIIA
SYTKAAVAAGWHVTIVSSDKDLMQLIQPGVDMYDTMKNERRGADYVMTKFGVQPEQLGDV
LALMGDSVDNVPGIPGIGPKTAAKLISEYGNLEAALEAAPSMKKSKMQENLIAHADMARL
SRRLVALHDAMDLPEPLDDLTLKGIPLEPLQAFLEHHGFKSLLARAGAPAAAVAVATAAA
AVTQATPPAAPVHEEEPPIDRSLYETVVTEEALDRWIAAAHAEGLVAVDTETDMLDCVSC
ALVGVSLAVGPNAACYIPVGHGGRDMFAEKPDQLPLALVLAKLKPLLEDDSVLKIGQNLK
YDITVLRRHGIEITPYDDTIVMSFDLDAGQSLAGHGMDEAAKVHLNHICISFKDVCGTGK
SQISFAEVPLDKATEYAAEDADVTLRLWKLFKTRVANEGATRVYELVDRPLVSVIAKMEH
EGIKVDREALSRLSAEFTAGIAALETEIHGLAGQPFAIGSTQQLGAILFEKMGYKGGKKG
KSGAYSTDVTILEQLKAQGAEIAGKILDWRQLAKLKSTYTDALQAQINRDTSRVHTSYSL
SGAQTGRLSSTDPNLQNIPIRTEVGRQIRHAFVAEPGNVILAADYSQIELRLAAHMADVP
ALKEAFANGEDIHAATAQQLFGEVNRDTRGRAKTINFAILYGISRWGLAGRLEISADEAQ
DMISRYYERFPGISLYITETIERARSRGYTETLFGRKTWFPRIKASVQHERQGAERAAIN
APIQGTSADIIKRAMARMGPALAAEGLHKVKMLLQVHDELVFELPKGDVGHASAVIRRIM
EGAAEPIVKLSVPLGVEIGHGPSWGAAH
NT seq 2787 nt   +upstreamnt  +downstreamnt
atgcctcagaatcatctctacctcgtcgacggcagcggctacatcttccgcgcctatcat
cagcttccgccgctcaccaacaagcatggccagcccgtcggcgcggtctatggctacacc
accatgctctggaagctggccgatgagttgggcaaagcagaaggcccaacccatctcgcg
gtgatactggacaagggcagccacaccttccgcaacgacatgtacgaccagtataaggcg
aaccgcccgcccgcgccggaagacctcgtcccgcaattcccgatgatccgcgacgccacc
cgcgccttctccctcccctgcatcgaggaagcgggtttcgaggccgacgacatcatcgcc
agctatacgaaagccgccgtcgcggcgggctggcatgtcaccatcgtcagctccgacaag
gatttgatgcagctcatccagcccggcgtcgacatgtacgacacgatgaagaatgagcgg
cgcggcgccgactatgtcatgaccaagttcggcgtccagcccgagcaattgggcgacgtg
ctggcgctgatgggcgacagcgtcgacaacgtgcccggcatccccggcatcggccccaag
accgccgccaagctcatcagcgaatatggcaatctggaagccgcgctcgaagccgcgcct
tcgatgaaaaagtcgaagatgcaggaaaatctcatcgcccatgccgacatggcgcgcctc
tcgcgccgcctcgtcgcgctgcacgatgcgatggacctgcccgaaccgctggacgacctg
acgctcaagggcatcccgcttgagccgttgcaggccttcctcgaacatcatggcttcaag
tcgctgctcgcccgcgcaggcgcgcccgccgccgccgtggccgtcgcgaccgcggccgcc
gccgtcacacaagcgacgccccccgccgccccggttcatgaggaagaaccgccgatcgac
cgcagcctctacgaaacggtcgttaccgaggaagcgctcgaccgctggatcgccgccgct
catgccgaaggtctggtcgccgtcgacaccgaaaccgacatgctcgactgcgtctcctgc
gcgctggtcggcgtcagcctcgccgtcggccccaacgccgcctgctacatccccgtcggc
catggcggaagggacatgttcgcggaaaagcccgaccagctccccctcgccctcgtcctt
gccaagttgaagccgctgctcgaagacgacagcgtcctcaaaatcggccagaacctgaaa
tatgacatcacggtcctgcgccgccatgggatcgagatcacgccctatgacgacaccatc
gtcatgagcttcgacctcgacgcgggccagagcctcgccggccacggcatggacgaggca
gccaaggtccacctcaaccatatctgcatcagcttcaaggatgtgtgcggcaccggcaag
agccagatcagcttcgcggaagtcccgctcgacaaggcgaccgaatatgccgccgaggac
gcggacgtcacactacgcctgtggaagctgttcaagacccgcgtcgccaatgaaggcgcg
acccgcgtttatgaactggtcgaccgcccgctcgtctccgtgatcgcgaagatggagcat
gaagggatcaaggtcgaccgcgaagccctgtcccgcctgtccgctgagttcaccgccggc
atcgccgcgctggaaacggaaatccatggcttggcgggccagcccttcgccatcggctcg
acccagcagcttggcgcgatcctgttcgagaaaatgggatataagggcggcaagaagggc
aagtccggcgcctattccaccgatgtcaccatccttgagcagttgaaggcccagggcgcg
gaaatcgctggaaaaatcctcgactggcgacagcttgccaagctcaaatccacctatacc
gatgcgctccaggcccagatcaacagggacaccagccgcgtccacaccagctacagcctg
tcgggcgcgcaaacaggccgcctgtcctcgaccgaccccaatctccagaacatccccatc
cgcaccgaagtcggccgccagatccgccacgccttcgtcgcggagccgggcaatgtcatc
ctggcggcggactatagccagatcgaactacgcctcgccgcccatatggcggacgttcca
gcactgaaagaagccttcgcgaacggtgaggacattcacgccgccacagcccagcaattg
ttcggagaggtcaaccgcgacacacgcggccgggccaagacgatcaacttcgcgatcctc
tacggcatcagccgctggggtctcgcgggacggctggagatcagcgccgacgaagcgcag
gacatgatcagccgctattatgagcgcttccccggcatcagcctctacatcaccgaaacg
atcgagagggctcgctcaaggggctataccgaaaccctcttcggccggaaaacctggttc
ccgcgcatcaaagcgtcagtccagcatgaacgtcagggcgccgaacgcgccgcgatcaac
gccccgatccagggcaccagcgccgacatcatcaagcgcgccatggcccgcatgggaccg
gcgctggcggcggaaggactgcacaaggtcaagatgctgctgcaagtgcatgacgaactg
gtgttcgaactgccgaaaggcgatgtcgggcatgccagcgccgtcatccgccgcatcatg
gaaggggctgcggagccgatcgtgaagctgagcgtcccgctaggcgtagaaatcggccac
ggcccgagttggggcgcggcgcactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (26)   

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