KEGG   Sphingobium sp. TKS: K426_15365
Entry
K426_15365        CDS       T04965                                 
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
spht  Sphingobium sp. TKS
Brite
KEGG Orthology (KO) [BR:spht00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:spht03016]
    K426_15365 (truA)
Enzymes [BR:spht01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     K426_15365 (truA)
Transfer RNA biogenesis [BR:spht03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    K426_15365 (truA)
 Prokaryotic type
    K426_15365 (truA)
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: AMK24005
UniProt: A0A126RQX3
Position
1:3090257..3091003
AA seq 248 aa
MTRFAFTVEFDGRPFMGWQRQAHGPSVQQAIEQAIFAVTGERVAIHAAGRTDAGVHGLAM
RAHADIAKDFTPFRLMEALNALLRPAPVAILACEVVPDDWHARFSCIGRSYVYRIANRRA
PLTWENGLVWRVIQPLDAAAMQEAAQLLVGRHDFTTFRSVHCQAESPVKTLDRLDVERSG
DRIAIFAEARSFLHHQVRSMVGCLAMVGMGRWSIGNLEAARDAKNRAALGLNAPPDGLYF
VSARYPGE
NT seq 747 nt   +upstreamnt  +downstreamnt
atgacgcgattcgccttcaccgtcgaatttgacggccgccccttcatgggctggcaacgg
caggcccatggccccagcgtccagcaggcgatcgagcaggcgatctttgccgtcacgggt
gagcgggtcgcgatccatgccgccgggcgcaccgatgcgggcgtccacgggcttgccatg
cgcgcccatgcggacattgcgaaggacttcacgccctttcgtctgatggaggcgctgaac
gcgcttcttcgacccgcgcccgtcgcgatcctggcctgcgaggtggtgcccgatgactgg
catgcccgcttttcctgcatcggccggtcctatgtctatcgcatcgccaaccgccgcgcg
ccgctgacctgggaaaatgggctggtctggcgggtgatccagccgctcgatgccgccgcg
atgcaggaagcggcgcagcttctggtcgggcggcatgacttcaccaccttccgctcggtc
cattgccaggcggaaagtccggtgaagacgctggaccggctggacgtggagcgttcaggt
gaccggatcgccatatttgcggaggcacggtccttcctgcatcatcaggtgcggtcgatg
gtgggatgccttgccatggtcggcatggggcgctggtcgatcgggaatctggaggctgcg
cgggatgcgaagaatcgggcggcgctggggctgaatgcaccgccggacgggctatatttc
gtgagcgcgcgctatcccggcgagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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