KEGG T04965: K426

Sphingobium sp. TKS: K426_16640

Entry

K426_16640        CDS       T04965

Name

(GenBank) 16S rRNA m(4)C1402 methyltransferase

K03438

16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]

Organism

spht Sphingobium sp. TKS

Brite

KEGG Orthology (KO) [BR:spht00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spht03009]
    K426_16640
Enzymes [BR:spht01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.199  16S rRNA (cytosine1402-N4)-methyltransferase
     K426_16640
Ribosome biogenesis [BR:spht03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    K426_16640

SSDB

Motif

Pfam:

Methyltransf_5 Methyltransf_31 FtsJ Methyltransf_25

Other DBs

NCBI-ProteinID:

AMK24260

UniProt:

A0A126RPS5

Position

1:complement(3369770..3370723)

AA seq 317 aa
MSAPVDPDRHIPVLIDEVLDALAINPGEVHVDGTFGAGGYSSAMVGKGAKVFAFDRDPDA
IREGQALADEKGITLIAGEFSRMEELLAQRGVPSVAGVTLDIGVSSMQLDRPERGFSFQG
DGPLDMTMSQSGMSAADFLNNAPEQEIADVLYRYGEEPRSRRVAKAIVEARPLERTGQLA
SVVRRALGHKPHDKKDPATRTFQAIRIHVNRELEELERGLEAAEAILEEGGRLAVVTFHS
LEDRIVKQFLRNRSGGEAGGSRHLPQKKLGPAPTFEKPAKAVRPGEAELARNPRARSATL
RSAIRTSAPVATRSPRS

NT seq 954 nt +upstreamnt +downstreamnt
gtgagcgctcccgtcgaccccgatcgtcacattccggtgctcatcgacgaagtgctcgac
gctctcgccatcaaccccggcgaggtccatgtcgacggcacattcggcgcgggcggctat
tccagcgccatggtgggcaagggcgcgaaggtcttcgccttcgaccgcgatcccgatgcg
attcgggaaggacaggcgctggccgacgagaagggcattaccctgatcgccggtgagttt
tcgcggatggaggaactgctggcgcagcggggcgtgccctcggtggcgggcgtgacgctg
gatattggcgtgtcctccatgcaattggaccggccggagcggggtttttccttccagggt
gacgggccgctggacatgaccatgagccagagcggcatgagcgccgccgatttcctcaac
aatgcccccgagcaggaaattgccgatgtcctgtatcgctatggcgaggagccgcgctcg
cgccgcgtggcgaaggcgattgtcgaggcgcgtccgttggagcgtaccggccagttggcg
agcgtcgtgcgccgggcgctcggccacaagccgcatgacaagaaagacccggccacccgg
accttccaggcgatccgcatccatgtgaatcgcgaactggaggagctggagcgcgggttg
gaggcggccgaggcgatattggaggaaggcgggcggttggcggtcgtgaccttccacagc
cttgaggaccgcatcgtcaagcagttcctgcgcaatcgcagtggtggcgaagcaggtgga
tcgcgccatttgcctcagaagaagctcggtcccgcgcccactttcgaaaagcctgccaag
gcggtgcggcccggagaagcggagctggcccgcaatccccgagcccgatccgccaccctg
cgcagcgccattcgcacttccgcccctgttgccacccggagtccccgctcatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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