KEGG   Sphingobium sp. TKS: K426_23169
Entry
K426_23169        CDS       T04965                                 
Name
(GenBank) formate dehydrogenase subunit alpha
  KO
K00123  formate dehydrogenase major subunit [EC:1.17.1.9]
Organism
spht  Sphingobium sp. TKS
Pathway
spht00630  Glyoxylate and dicarboxylate metabolism
spht00680  Methane metabolism
spht01100  Metabolic pathways
spht01120  Microbial metabolism in diverse environments
spht01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:spht00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    K426_23169
  09102 Energy metabolism
   00680 Methane metabolism
    K426_23169
Enzymes [BR:spht01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.1  With NAD+ or NADP+ as acceptor
    1.17.1.9  formate dehydrogenase
     K426_23169
SSDB
Motif
Pfam: Molybdopterin Molydop_binding Fer2_4 Molybdop_Fe4S4 NADH-G_4Fe-4S_3 Fer4_7 Fer4 Fer4_21 Fer4_10 Fer4_9 Fer4_6 Fer4_8 Fer4_2 Fer4_16 Fer4_15 Fer4_4 TPP_enzyme_M
Other DBs
NCBI-ProteinID: AMK25537
UniProt: A0A126RTS4
Position
2:complement(496412..499258)
AA seq 948 aa
MTYTREADHGTPPAVATSKSVTLTIDGDMVTMPEGTSIMRAASLTGCSIPKLCATDNVES
FGSCRLCLVEVEGRNGYPASCTTPIAEGMVVRTQSERLKQLRRGVMELYISDHPLDCLTC
PANGDCELQEQAGAVGLRDVRYGYDGATNMGQAKDQSNPYFDFDPSKCIVCSRCVRACDE
VQGTFALTIEGRGFDSKVSPSQGQDFLSSECVSCGACVQACPTATLTEKKVVEIGTPDRA
VVTTCAYCGVGCTFRAEMRGEELVRMVPWKEGKANHGHSCVKGRFAWGYAQHRDRILKPM
IRASVDEPWREVSWEEAIAHTASEFKRIQAKYGTRSIGGITSSRCTNEETFLVQKLIRQG
FGNNNVDTCARVCHSPTGYGLKTTFGTSAGTQDFDSVAEADVILVIGANPTDGHPVFASR
MKKRLREGAKLIVIDPRRIDLVKSPHVEAAHHLPLRPGTNVAMLTAMAHVIVTENLFDEA
FIRDRCDWDEFMDWAAFVAEPSRSPEAIEPLTGVKAEEVRAAARLYATGGNAAIYYGLGV
TEHSQGSSTVMAIANLSMATGNVGREGVGVNPLRGQNNVQGACDMGSFPHEFSGYRHVSD
DAVRGQFERAWGVTLDAEPGLRIPNMLDAATDGTFKGIFIQGEDILQSDPNTHHVAAGLA
AMECVVVQDLFLNETANYAHVFLPGSTFLEKDGTFTNAERRIQRVRKVMAPLNGYGDWEI
VQLVAQAMGLGWSYAHPSEIMDEIAALTPTFAGVHYDRLDVEGSLQWPANDAAPDGTPTM
HIDGFVRGRGKFVVTDYVPTDEKTGPRFPLLLTTGRILSQYNVGAQTRRTANEAWHPEDR
LEIHPADAENRGIKDGDWVSLKSRAGETSLRALITERVAPGVVYTTFHHPDTQANVITTD
YSDWATNCPEYKVTAVQVMPSNGPSDWQRDYADQARHSRRIAPLAAAQ
NT seq 2847 nt   +upstreamnt  +downstreamnt
atgacctatacgcgcgaagccgatcatggaacgccgcctgctgtcgcgacgagcaagagc
gtgaccctcaccatcgatggcgatatggtcaccatgccggagggcacgtcgatcatgcgg
gcggcttcgctgaccggctgctcgatcccgaaactgtgcgcgacagacaatgtcgagagc
ttcggctcctgccgcctctgtctggtcgaagtcgaagggcgcaatggctatcccgcttcc
tgcaccacgccgattgccgagggcatggtggtgcggacgcagagcgagcggttgaagcag
ttgcggcgcggggtgatggagctttacatctccgaccatccgctcgactgcctgacctgc
ccggctaatggcgattgcgagttgcaggaacaggcgggcgcggtgggcctgcgcgacgtg
cgctatggctatgatggcgcgaccaatatggggcaggcgaaggaccagtcgaacccctat
ttcgacttcgaccccagcaaatgcatcgtctgttcgcgctgcgtgcgggcttgcgacgag
gtgcaggggacttttgcgctgaccatcgagggaaggggcttcgattccaaggtttcccca
tcccaagggcaggatttcctgtcgtccgaatgcgtgtcctgcggcgcctgcgtccaggcc
tgcccgaccgccacgctgaccgagaaaaaggtggtggagatcggcacgccggaccgggcg
gtcgtgaccacctgcgcctattgcggcgtcggctgcaccttccgcgccgagatgcggggc
gaggagctggtgcggatggtgccgtggaaggagggcaaggccaatcacgggcatagctgc
gtgaagggccgcttcgcctggggctatgcccagcatcgcgaccgcatcctgaagccgatg
atccgcgcttcggtggacgaaccctggcgcgaggtgtcgtgggaggaggccatcgcccat
accgccagcgagttcaagcgcatccaggcaaaatatggcacgcgcagcatcggcggcatc
acctccagccgctgcaccaatgaggagaccttcctcgtccagaagctgatccggcagggt
ttcggcaacaataatgtagatacctgcgcgcgggtctgccattccccgacgggctatgga
ttgaagacgacgttcggcacttcggcgggcacgcaggatttcgacagcgttgccgaggcc
gacgtcattctggtcatcggcgccaatccgaccgacggccatcccgtcttcgccagccga
atgaagaagcggctgcgcgagggcgcgaagctgatcgtcatcgatccccggcggatcgat
ctggtgaagtcgccccatgtcgaggcggcgcatcatctgccgctgcggcccggcaccaat
gtcgccatgctgacggcgatggcgcatgtgatcgtgacggaaaatctcttcgacgaagcc
ttcatccgggatcgttgcgactgggatgaatttatggactgggcggccttcgtcgctgaa
cccagccgctcgcccgaggcgatcgagccgctgacgggggtgaaggcggaagaggtgcgc
gcggcggcgcggctttatgccaccgggggtaacgccgcgatctactatggtcttggcgtc
accgagcatagtcaagggtcgtccaccgtcatggcgattgccaacctctccatggcgacc
ggcaatgtcgggcgcgagggcgtcggcgtgaaccctttgcgcgggcagaataatgtgcag
ggcgcctgtgacatgggcagcttcccgcacgaattttccggctatcgccatgtgtcggac
gatgctgtgcgcggccagttcgagcgggcctggggcgtgacgctggatgccgagccgggc
ctgcgcatccccaatatgctcgacgcggcgacggacgggacgttcaagggcatcttcatc
cagggcgaggatattcttcagtccgaccccaatactcatcatgtcgcggcgggccttgcc
gcgatggaatgcgtggtggtgcaggatctgttcctcaatgagaccgccaattacgcccat
gtcttcctgccggggtcgacctttctggagaaggatggaaccttcaccaatgccgaacgg
cgcatccagcgcgtgcgcaaggtgatggcgccgctcaatggttatggcgattgggagatc
gtccagcttgttgcgcaggccatggggcttggctggtcctatgcgcatccgtccgagatc
atggacgagatcgccgcgctgaccccgaccttcgcgggcgtgcattatgaccggctggac
gtggaaggatcgctgcaatggcctgccaatgacgcggcgccggacgggacgccgaccatg
catatcgacggcttcgtgcgcggcaggggcaaattcgtcgtcaccgactatgtgccgacc
gatgagaaaaccgggccgcgcttcccgctgttgctgacgaccggccgcatcctcagccaa
tataatgtcggcgcgcagacgcggcggacggcgaacgaggcctggcatccggaggaccgg
ctggaaatccatccggccgatgcggagaaccggggaatcaaggatggcgattgggtctcg
ctcaagagccgggccggggaaaccagtctgcgcgcattgatcaccgagcgggtcgcgccg
ggcgtggtctacaccaccttccaccatcctgatacgcaggccaatgtcatcaccaccgac
tattcggactgggccaccaactgcccggaatataaggtgacggcggtacaggtcatgccc
tccaacgggccaagcgactggcagcgcgactatgccgatcaggcccgccacagcaggcgg
attgcgccgctggcagcggcgcaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (36)   

Download RDF
DBGET integrated database retrieval system