KEGG   Uncultured Sphingopyxis sp. UC10: SPPYR_1877
Entry
SPPYR_1877        CDS       T05531                                 
Symbol
rnc
Name
(GenBank) Ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
sphu  Uncultured Sphingopyxis sp. UC10
Brite
KEGG Orthology (KO) [BR:sphu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sphu03019]
    SPPYR_1877 (rnc)
   03009 Ribosome biogenesis [BR:sphu03009]
    SPPYR_1877 (rnc)
   03036 Chromosome and associated proteins [BR:sphu03036]
    SPPYR_1877 (rnc)
Enzymes [BR:sphu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     SPPYR_1877 (rnc)
Messenger RNA biogenesis [BR:sphu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SPPYR_1877 (rnc)
Ribosome biogenesis [BR:sphu03009]
 Eukaryotic type
  90S particles
   RNase
    SPPYR_1877 (rnc)
 Prokaryotic type
  rRNA processing factors
   SPPYR_1877 (rnc)
Chromosome and associated proteins [BR:sphu03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     SPPYR_1877 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM Glyoxalase_6
Other DBs
NCBI-ProteinID: SBV32997
UniProt: A0A1Y5PZQ4
Position
SPPYR:complement(2003647..2004327)
AA seq 226 aa
MSDILDTGALADIIGCTPDDIALYDLALTHGSTGRADYQRLEFLGDRVLGLVIASELYTR
FPAASEGEMSSRLHVLASGATCATIAQKLDLTALIRFGAQARNDGGRYSDNIAADAIEAL
IGALYLDKGAEAARRFILTYWNEMIDGQQAAPKHPKAALQEWALARKRRPPEYEIVSREG
PDHAPRFRVAVRVGKLARAEAEGASKQAAEKAAAAALLAELEGMKK
NT seq 681 nt   +upstreamnt  +downstreamnt
ttgagcgatattctcgacaccggggctctcgccgacattatcggctgcactccggatgat
atcgcgctctacgacctcgcgctgacgcatggcagcaccgggcgcgccgattatcagcgg
ctcgagttcctcggcgatcgcgttctcggcctcgtcatcgcgtccgaactctacacgcgc
tttcccgcggcgagcgagggcgagatgtcgtcgcggctgcatgtgctcgcctcgggcgcg
acctgcgccacgatcgcgcaaaagctcgacctcaccgcgctgatccgtttcggcgcgcag
gcgcgcaacgacggcggccgctacagcgacaatatcgccgccgacgcgatcgaggcgctg
atcggcgcgctctatctcgacaagggtgcggaagcggctcggcgattcattctgacctac
tggaacgagatgatcgacgggcagcaggcggcgcccaagcatcccaaggcggcgctccag
gaatgggcgcttgcgcgcaagcgccgcccgcccgaatatgagatcgtgtcgcgcgagggc
cccgaccatgcgccgcgcttccgcgtcgcggtgcgcgttggcaagctcgcgcgcgccgaa
gccgagggcgccagcaaacaggcggcggagaaggccgcggcggcagctctgcttgccgaa
ctcgaaggaatgaaaaaatga

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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