KEGG   Sphingopyxis sp. PAMC25046: E5675_03290
Entry
E5675_03290       CDS       T06315                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
sphx  Sphingopyxis sp. PAMC25046
Brite
KEGG Orthology (KO) [BR:sphx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sphx03016]
    E5675_03290 (truB)
Enzymes [BR:sphx01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     E5675_03290 (truB)
Transfer RNA biogenesis [BR:sphx03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    E5675_03290 (truB)
 Prokaryotic type
    E5675_03290 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2
Other DBs
NCBI-ProteinID: QCB53560
UniProt: A0A4P7RRI3
Position
715350..716306
AA seq 318 aa
MNGWIILDKPVGLGSTQAVGAVKRVCREAGLGKVKVGHGGTLDPLASGVLPIALGEATKL
CGRMLDASKVYDFTIAFGTETAGLDAEGEVVATSDARPTLAEVEAVLPRFTGPIEQVPPA
YSAIKIDGERAYDRARKGEAVEMKARSVTIYSLRHPGLDPGSRSATVKSGTPDQVRGDEA
GGRLESITLTAHVSKGTYIRSLARDIARAVGSVGHVTMLRRTKAGPFALEQAISLDKLNA
FGQGAAQSEIFLPLEAGLVDIPALNLSPEAAGAIRQGRVWTGGSTEDGLYWGRDSEMRPV
ALIEALAGTLKVVRGFNL
NT seq 957 nt   +upstreamnt  +downstreamnt
atgaacggctggatcattctcgacaaacccgtagggctcggctcgacgcaggcggtgggc
gcggtgaagcgcgtgtgccgcgaggcggggctcggcaaggtcaaggtcggccatggcggc
acgctcgatccgctcgcgtcgggggtactgccgatcgcgctcggcgaggcgaccaagctc
tgcgggcggatgctcgatgcgagcaaggtttacgatttcaccatcgccttcgggacggag
acggcgggactcgacgccgagggcgaggtggtcgcgacgagcgatgcgcgaccgacgctt
gccgaggtagaggcagtgctgccgcgtttcaccggaccgatcgagcaggtgccgccggcc
tattcggcgatcaagatcgacggcgagcgggcgtatgaccgcgcgcgcaagggcgaagcg
gtcgagatgaaggcgcggagcgtgacgatctactctcttcgtcaccccggacttgatccg
gggtcccgctcagcgacggtgaaaagcgggaccccggatcaagtccggggtgacgaggca
ggggggcggctcgaatcgatcaccctcactgcccatgtctcgaagggcacctatatccgc
agcctcgcgcgcgacatcgcgcgcgcggtcggcagcgttggtcacgtcacgatgctccgc
cgcaccaaggcgggccccttcgcgctcgaacaggcgatttcgctggacaaattgaacgca
ttcggccaaggggccgcccaatcagaaatatttctgccgctcgaggcagggctggtcgac
atcccggctctgaacctttccccggaagcggcaggggcgatccgtcagggtcgcgtctgg
accgggggtagcaccgaagacgggctctattggggaagggacagcgaaatgcgtcccgtt
gccctgattgaggctttggcgggaacgctgaaggtcgtccggggcttcaatctgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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