KEGG   Sphingopyxis sp. PAMC25046: E5675_03405
Entry
E5675_03405       CDS       T06315                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
sphx  Sphingopyxis sp. PAMC25046
Pathway
sphx03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:sphx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    E5675_03405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sphx03021]
    E5675_03405
   03400 DNA repair and recombination proteins [BR:sphx03400]
    E5675_03405
Enzymes [BR:sphx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     E5675_03405
Transcription machinery [BR:sphx03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     E5675_03405
DNA repair and recombination proteins [BR:sphx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      E5675_03405
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2 DUF211 TmoB IDH
Other DBs
NCBI-ProteinID: QCB53582
UniProt: A0A4P7RV28
Position
complement(736252..737310)
AA seq 352 aa
MTVNIRNWQELKKPSNLEIKAGSDGKRKATFVAEPLERGFGLTLGNALRRVLLSSLQGAA
ITSIKIENVLHEFSSLAGVREDVTDIVLNVKQIALKMEGEGPKRLQLSATGPATVKAGDI
MVSGDIKVMNPNHVICHLDDGATLNMELVADTGKGYVPATANRPVDAPIGLIPVDSLYSP
VRQVAYKVDNARIGQELDYDKLNLTVETDGTVTPEDAVAYAARILQDQLQVFVHFEEAMN
DSGLIGMAAPSTTADESDVNQLNRFLLKKVDELELSVRSANCLKNDNIIYIGDLVQKTEA
EMLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgactgtcaatatccggaactggcaggaattgaagaagcccagcaacctggaaatcaag
gctggcagcgacggcaagcgcaaggcgaccttcgtcgccgagccgctcgagcgcggtttc
ggcctgacgctcggcaacgcgctgcgccgcgtgctgctctcgtcgctccagggtgcggca
atcacgtcgatcaagatcgagaacgtcctccacgaattctcgagcctcgccggcgtgcgt
gaagacgtcaccgacatcgtactcaacgtgaaacagatcgcgctcaagatggaaggcgaa
ggcccgaagcggctccagctttcggcgaccggtcccgcgaccgtcaaggccggcgacatc
atggtgtcgggcgacatcaaggtgatgaacccgaaccatgtcatctgccacctcgacgat
ggcgcgacgctgaacatggaactcgttgccgacaccggcaagggttatgtccccgcgacc
gccaaccgtccggtcgacgcgccgatcggcctgatcccggtcgactcgctctactcgccc
gtgcgtcaggtcgcctacaaggtcgacaatgcgcgcatcggtcaggaactggactatgac
aagctgaacctcaccgtcgaaaccgacggcacggtgacccccgaagatgccgtcgcctat
gccgcgcgcatccttcaggaccagctccaggtcttcgtccacttcgaagaggcgatgaac
gacagcggcctcatcggcatggcggcaccgtcgaccaccgccgacgagtcggacgtcaac
cagctcaaccgtttccttctgaagaaggtcgacgagctcgaactgtcggtccgctcggcg
aactgcctcaagaacgacaacatcatctatatcggtgacctcgttcagaagaccgaagcc
gaaatgctccgcacgccgaacttcggccgcaagtccttgaacgaaatcaaggaagtgttg
tcgtcgatgggcctgcgcctcggcatggacatccccggctggccgccggagaatatcgag
gaaatggccaagaagctcgaacaggaacttctcggataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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