KEGG   Sphingorhabdus sp. YGSMI21: CHN51_04560
Entry
CHN51_04560       CDS       T05308                                 
Symbol
groL
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
sphy  Sphingorhabdus sp. YGSMI21
Pathway
sphy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sphy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CHN51_04560 (groL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sphy03019]
    CHN51_04560 (groL)
   03110 Chaperones and folding catalysts [BR:sphy03110]
    CHN51_04560 (groL)
   03029 Mitochondrial biogenesis [BR:sphy03029]
    CHN51_04560 (groL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sphy04147]
    CHN51_04560 (groL)
Enzymes [BR:sphy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     CHN51_04560 (groL)
Messenger RNA biogenesis [BR:sphy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     CHN51_04560 (groL)
Chaperones and folding catalysts [BR:sphy03110]
 Heat shock proteins
  HSP60 / Chaperonin
   CHN51_04560 (groL)
Mitochondrial biogenesis [BR:sphy03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    CHN51_04560 (groL)
Exosome [BR:sphy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CHN51_04560 (groL)
  Exosomal proteins of other body fluids (saliva and urine)
   CHN51_04560 (groL)
  Exosomal proteins of breast cancer cells
   CHN51_04560 (groL)
  Exosomal proteins of colorectal cancer cells
   CHN51_04560 (groL)
  Exosomal proteins of bladder cancer cells
   CHN51_04560 (groL)
SSDB
Motif
Pfam: Cpn60_TCP1 EAD9
Other DBs
NCBI-ProteinID: ATW02881
UniProt: A0A2D3RB22
Position
complement(956270..957922)
AA seq 550 aa
MAAKDVKFGRDARERILKGVNTLADAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEI
ELKDKFENMGAQMLREVASKTNDVAGDGTTTATVLAQAIVKEGMKSVSAGMNPMDLKRGI
DQAVEAVVADLKKRSKDVKGSEEIAQVGIISANGDREVGEKIAEAMEKVGKEGVITVEEA
KGLDFELDVVEGMQFDRGYLSPYFITNPDKMIADLENPYILIHEKKLTNLQPLLPILEAV
VQAGRPLLIIAEDIEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTKGEM
ISEDLGIKLESVTLNMLGEAKNVTIDKDNTTIVDGAGKKADIKARVEAIRSQIENTTSDY
DKEKLQERLAKLAGGVAVIKVGGATEVEVKEKKDRVDDALHATRAAVEEGIVPGGGSALL
YATSALKGLEGVNDDQTRGIDIVRKALQAPVRQIAENAGFDGAVVAGKMLDQKSKEFGFN
ASTDVYEDLVKAGVIDPTKVVRAALQDASSVAGLLITTEAAVAETPSEDKAGGGMPDMGG
MGGGMGGMGF
NT seq 1653 nt   +upstreamnt  +downstreamnt
atggctgctaaagacgtaaaatttggtcgcgacgctcgcgaacgcatcctcaagggtgtg
aacacgctggctgacgccgttaaagtaaccctcggccccaaaggccggaacgttgtgctc
gacaagagctttggcgcaccgcgcatcaccaaggacggtgtttcggttgccaaggaaatc
gaactgaaagacaagttcgaaaatatgggcgcacagatgcttcgtgaagtcgcatcgaaa
accaacgatgttgctggcgacggcaccaccaccgcaaccgttctcgcccaggcgatcgtc
aaggaaggcatgaaatccgtttctgccggcatgaacccgatggatctgaagcgcggcatc
gaccaggctgttgaagccgtggttgcggatctcaagaaacgctcgaaagacgtcaagggc
agcgaagaaattgcccaggttggcatcatctccgccaacggcgaccgtgaagttggcgag
aaaatcgccgaagccatggaaaaagtcggcaaggaaggcgttattacggttgaagaagcc
aagggtctcgactttgaactcgacgttgtcgaaggcatgcagtttgaccgcggttacctg
tccccttatttcatcaccaacccggacaagatgattgcggacctcgaaaatccctacatc
ctgatccacgaaaagaagctgaccaacctgcagccactgcttccgattctggaagccgtt
gtccaggccggacgtccgcttttgatcattgccgaagatatcgaaggcgaagcgctggcg
accctcgtggtcaacaagctgcgtggcggcctgaagatcgctgcggtcaaggcacctggt
ttcggtgatcgccgtaaagcgatgctcgaagatattgcgatcctcaccaagggtgaaatg
atctccgaagatctcggcatcaagctggaaagcgttacgctgaacatgctcggtgaagcc
aagaatgtcacgatcgacaaggataacaccacgatcgtcgacggcgctggcaagaaagcc
gacatcaaggcacgtgttgaagcgatccgttcgcagatcgaaaacaccacttccgactat
gacaaagagaagctgcaggaacgtctggcgaaactcgctggcggtgttgccgtgatcaaa
gtcggcggcgcgaccgaagtcgaagtgaaagagaagaaagaccgtgtcgacgacgcgctg
cacgcaacccgtgctgccgttgaagaaggcattgtccctggcggcggttccgctctgctc
tatgcaacttcggcactcaaaggtcttgaaggcgttaacgacgaccagacccgcggtatc
gacattgttcgcaaggcgctgcaggctccggttcgtcagatcgctgaaaatgcgggcttt
gacggcgcggttgttgccggcaagatgctggaccagaagagcaaggaattcggcttcaac
gcatcgaccgatgtttatgaagaccttgtcaaagctggcgtcatcgatccgaccaaggtt
gtgcgtgcagcactgcaggacgcgtcgtcggttgccggtctgctgatcaccaccgaagcg
gctgtcgctgaaacaccatcagaagacaaagccggtggcggcatgcccgacatgggcggc
atgggcggcggcatgggcggaatgggcttctaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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