KEGG   Sphingorhabdus sp. YGSMI21: CHN51_11975
Entry
CHN51_11975       CDS       T05308                                 
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
sphy  Sphingorhabdus sp. YGSMI21
Pathway
sphy00470  D-Amino acid metabolism
sphy00550  Peptidoglycan biosynthesis
sphy01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:sphy00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    CHN51_11975 (murD)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    CHN51_11975 (murD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sphy01011]
    CHN51_11975 (murD)
Enzymes [BR:sphy01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     CHN51_11975 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:sphy01011]
 Precursor biosynthesis
  Amino acid ligase
   CHN51_11975 (murD)
SSDB
Motif
Pfam: Mur_ligase_M MurD-like_N Mur_ligase_C Peripla_BP_4 2-Hacid_dh_C DUF2999
Other DBs
NCBI-ProteinID: ATW04163
UniProt: A0A2D3REM9
Position
2468813..2470147
AA seq 444 aa
MIISPVFAGKRYAILGLARSGMAVLESLHASGAELLAWDNREELRDSVADKALIADPLES
DLTGYDAIVVSPGVPLNSHPIAQKAKADGVPIIGDIELFAQARAALPAHRVVGITGTNGK
STTTALVHHILQYAGLPSVMGGNIGAPILSQDPLPEGGVYVLELSSYQIDLTNSLDCDVA
LLLNISPDHLDRYDGFDAYAAAKARLFDMLGSDHAAIFASDDEKTQLALHGLRDLGRVKN
IFDTSGIELAGQPDWPSLQGPHNLQNAIAAIATVEALGIDEEQWRPALAAFNGLPHRMER
IVEANGVLFVNDSKATNPASTGPALGAYPKIHWILGGLPKSDRLTECEPFYGNVVRAYTI
GEAGPLFEKLLTGHMPVESCEMILTAVQRAAANAQPGEVVLLSPACASFDQFRDFEARGN
CFRSAVNSVIEKNLIGSASGEIRK
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgataatctctcccgtctttgccggaaagcgctatgccatcctcggactggcccggtcc
ggcatggcggtgctggaaagcctgcacgcgagcggcgccgaactgctcgcctgggacaat
cgtgaagaattgcgcgacagcgttgccgacaaggcgctgatcgccgatccgctggaaagc
gacctgaccggctatgatgcgatcgtcgtgtcgccgggcgtcccgctcaacagccatccg
atcgcgcaaaaggcaaaagctgacggtgttccgattatcggcgatatcgaattgttcgcc
caggcccgggcggcgctgcccgcccatcgcgtcgtcggcatcaccggcaccaacggcaag
tcgacaaccaccgctctggtccaccatatactgcaatatgccggcctgccgtcggtaatg
ggcggcaatatcggggctccgatcctgtcgcaggatccgctgcccgaaggcggtgtctat
gtattggagctgtcgagctaccagatcgacctgaccaacagtctcgactgcgatgtcgcg
ctgctgctcaacatcagtccggaccatcttgaccgttatgacggatttgatgcttatgcc
gctgccaaagcgcggctgttcgacatgctgggatccgatcacgccgcgatctttgccagc
gatgacgaaaagacgcagctggccttgcacggtctgcgcgatcttggccgggtgaagaat
atcttcgacaccagcggcatcgaactggccggacagccggactggccttcgctgcaaggt
ccgcacaatctccagaacgcgattgcagcgatcgccacggtcgaggctctcggcattgac
gaagagcaatggcgtccggcgctcgccgccttcaacggactgccgcaccggatggaacgc
attgtcgaagccaatggtgtgctgttcgtcaacgacagcaaggcaaccaatcccgcttca
accggcccggcgctgggtgcttatccgaaaatccactggattctcggcggtctgccgaaa
agcgacaggctgaccgaatgcgagcctttctacggaaatgtcgtcagggcctatacgata
ggcgaagccggccccctgtttgaaaaattgctgaccggacatatgccggttgaatcctgt
gaaatgatcctcaccgccgtgcaacgcgccgctgccaatgcacagcctggtgaagtggtg
ctgctgtcgccagcctgtgcctcgttcgaccagttccgggattttgaagcgcgcggcaat
tgtttccgcagcgccgtcaattcggtgatcgagaaaaatctgatcggatccgcgagcggg
gagataaggaaatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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