KEGG   Sphingorhabdus sp. YGSMI21: CHN51_16120
Entry
CHN51_16120       CDS       T05308                                 
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
sphy  Sphingorhabdus sp. YGSMI21
Brite
KEGG Orthology (KO) [BR:sphy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sphy03016]
    CHN51_16120
Enzymes [BR:sphy01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     CHN51_16120
Transfer RNA biogenesis [BR:sphy03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    CHN51_16120
 Prokaryotic type
    CHN51_16120
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: ATW04888
UniProt: A0A2D3RGN9
Position
3365305..3366048
AA seq 247 aa
MTRFAITLEYDGRPFMGWQHQDHGPSVQQAVEQAIHKITGQDVRVFAAGRTDAGVHALAM
RAHFDLETKLTPFRLSEGINAGLRPHPVAVLACDIVDEEWHARFACEGRRYLYKITNRRA
PLTFDRGLSWQVAPALDSDAMHNAAQALTGQHDFTTFRSVHCQAQSPVKTLDSISVSRFG
EEIEVEVAARSFLHHQVRSIVGCLKLVGTGKWTKVDLKNALKARDRNALGFNAPPDGLYF
VEAIYPE
NT seq 744 nt   +upstreamnt  +downstreamnt
atgacccgcttcgcgatcactctggaatatgatggccgcccgttcatgggttggcagcat
caggatcacggccccagcgtgcagcaggcggtggagcaggcgatccacaagatcaccggt
caggacgtacgcgtttttgcagccggcagaaccgacgccggcgtccacgccctggcgatg
cgcgcgcatttcgatcttgaaaccaagctgacgccgttccggctgagcgaaggcatcaac
gccggcctgcgtccccacccggtggcggtgctggcctgcgacattgtcgacgaggaatgg
cacgcccgcttcgcctgcgagggacgacgctatctctacaagattaccaaccgccgcgcg
ccgctgaccttcgaccgcgggctgagctggcaggttgccccggcactcgacagcgacgcc
atgcacaacgcggcgcaggcgctgaccggtcagcatgatttcaccacattccgctcggtc
cattgccaggcgcaaagcccggtcaagacgctcgacagcatatcggtcagccgcttcggc
gaggaaattgaagtcgaggtcgccgcccgctccttcctgcatcaccaggtccgttcgatc
gtcgggtgcctgaaactggtcggcaccggcaaatggacgaaagtggacctgaaaaacgcg
ctgaaagcgagagaccgcaatgcgctcggcttcaacgccccgccggacggtctctatttt
gtcgaagccatctatccggaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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