KEGG   Sphingorhabdus sp. YGSMI21: CHN51_16610
Entry
CHN51_16610       CDS       T05308                                 
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
sphy  Sphingorhabdus sp. YGSMI21
Brite
KEGG Orthology (KO) [BR:sphy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sphy03400]
    CHN51_16610 (addA)
Enzymes [BR:sphy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CHN51_16610 (addA)
DNA repair and recombination proteins [BR:sphy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     CHN51_16610 (addA)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 UvrD_C_2 DUF2800 DEAD AAA_12
Other DBs
NCBI-ProteinID: ATW04970
UniProt: A0A2D3RGY0
Position
complement(3468105..3471557)
AA seq 1150 aa
MSSEKPKIFPLKDRQIDAVEPDAHIWLSASAGTGKTQVLTARVFRLLLTEKIDPEHILCL
TFTKAGAAEMAERINRQLAAWVRMDDTLLENDLRAIGASTGPEARARARTLFAQVLDAQG
GGLRIMTIHGFCQSLLASFPEEAGIASMFKPIEDRDQKILAREALGDLLLEEEQAGRPQI
VEAIQRLSVRMGEEATEQFLMTCAAKAEAMDGLPSGILPFVRQLLGLPIDGDAQSWLASR
CTDEAIDLRAITLLRDAMAEAGGKKEQERQLAIRLWLSLNPQERAAALPDVHLAWATKST
GAPPKPTKGLLKALPDYDFIAGSLYEWSSDLLGKAVLFEYADLFAGALQAGQAFYHRYAD
AKKLHGVVDFDDMIRMTARLLQKSDMAEWIRYKLDQRTDHILIDEAQDTNVAQWDIVRAL
AGEFFAGIGVKPERHRTLFTVGDFKQAIFGFQGTSPHNYANARTEFFALAEASEQPFGDL
SLDRSFRSTPPILKVVDATLEQLGHEQLGLDHRVPEHRSNYQDASGSVTLWKPIANRSDA
DDEDEESWASEEKRVIAQQLAVQIKQWLSPENPLWLERQKRALQPKDILILVSKRDELSA
LIVARLFAEKVPVAGIDRIRLNQPLVVQDLLAAIRFVLQPNDDLNLASLLVSPLLGWTQE
DLLARGHRGKANGEKSLWEFLRRQDGLGEQIKPLQQLLAMADFNTPYQFLETILSGPMQG
RRKLLSRLSHAAVDPLDELLATALAFERDHIPTLQGFLDWFDRGDVEIKREQVEGGNEVR
LMTVHGAKGLQAPLVILANATFDPASKKSGGFSIKLGEGTGRELEYPVVPVRKAERVGIL
AEHAAYADKVAMEEHWRLLYVAMTRAEEHLVVAGVLGPRAKGEVPELSWYGAMERGLTAL
GSEWREDPDWQAVREYRTESRNRPAAPAAPERAADGAGDHVPAPDWLFRAAPEESRPPRP
LTPSHLGPDDASNPPPDLTMRDAAERGILLHSLFQRLPNIAPARRMDVADRWLEKQKQIT
DPARRAEIIQTVLTVMGNPAWSALFAPESLAEAPIAAVVGEHVISGTVDRLLITDDQIYV
VDFKTGRRVPDSAEQAPVAYLRQMAAYVAALEKIFPDRSIKAGLLYSHGPQMLELAPDLI
ERHKPGFEPI
NT seq 3453 nt   +upstreamnt  +downstreamnt
atgagtagcgaaaagccgaaaatctttccgctgaaggaccggcagatcgatgcggtcgaa
cccgatgcccatatctggcttagcgcgtcggccggaaccggcaagacccaggttctgact
gcgcgcgtttttcgcctgctgctgaccgaaaagatcgatcctgaacatattctctgcctg
accttcaccaaggcgggcgcggcggaaatggcggagcggatcaaccggcaactggccgcc
tgggtgcggatggacgacaccctgctggaaaacgaccttcgcgccatcggcgcgtcgacc
ggacccgaggcgagagcccgggcgcgaaccttattcgcccaagttctcgatgcgcagggc
gggggcctgcggatcatgacgatccacggcttctgccagtccttgctcgcgtcgttcccg
gaagaggccggcatcgcctcgatgttcaagccgatcgaggaccgcgaccagaagatattg
gcgcgcgaggccttgggcgatttgctgctcgaggaagaacaggccgggcgcccgcagatt
gtcgaagcgattcagcgtttgagcgtccggatgggcgaggaggcgaccgagcaatttctg
atgacttgcgccgccaaggccgaagcgatggacgggctgccgtccggcatcttgcccttc
gtccgtcagctgctgggcctgccgattgacggcgatgcccagtcgtggctggccagccgc
tgcacagatgaagccattgatctgcgcgcaattaccctgttgcgcgatgcgatggcggaa
gccggcggcaagaaggaacaggagcggcagctcgcgatccgcctctggctgagcctcaat
ccgcaagaacgcgcagcagccttgcctgatgttcatctggcctgggcgaccaaatccacc
ggagccccgcccaaacccacgaaaggcctgctcaaagctctgccagactatgatttcatc
gccggatcgctgtatgagtggagcagcgaccttctcggaaaagcggtcctgttcgaatat
gccgacctgtttgcgggcgcactgcaggccggacaggctttctaccatcgctatgccgat
gccaaaaagctgcacggcgtggtcgatttcgacgacatgatccggatgaccgcccggctg
ttgcagaaaagcgatatggcggaatggatccgctacaagctcgaccagcgtaccgatcat
atattgatcgacgaggcgcaggataccaatgtcgcgcaatgggatatcgtccgcgcgctg
gccggtgaattttttgccggcataggcgtgaagcccgagcggcaccggacgctgttcacg
gtgggcgattttaaacaggctatcttcggctttcagggcactagtccgcataattatgcc
aatgcgcgcaccgaatttttcgcgctggcagaggcatcggaacagccgtttggcgacctg
tcgctggaccgcagtttccgctcgacgccgccgatattgaaagtggtcgatgcgacgctg
gaacagctgggccacgaacagctggggctcgatcatcgggtccctgagcatcgcagcaac
tatcaggatgcgagcggtagcgtgaccttgtggaaaccgattgccaacagaagcgatgcc
gacgatgaggacgaggaatcctgggccagcgaagagaaaagggtcattgcccagcagctg
gctgtgcagatcaagcaatggctgtcgccggaaaacccgctttggctggaacggcaaaaa
cgggcgctgcaacccaaggatatattgatattggtgagcaagcgcgacgagctcagtgcg
ctcatcgttgcccgtctgtttgccgaaaaggttccggtggcggggattgatcgtatccgc
ctcaaccagccgctggttgttcaagacctgctggccgcgatccgcttcgtgctacagcca
aatgacgatctcaacctcgccagcctgctggtttcgccgttgctcggctggacgcaagag
gatctgctggcgcgcggtcatcgcggcaaggccaatggcgagaagagcctctgggaattt
ctgcgccgacaggacggtctgggagagcagataaagccgttgcagcagctgctggcgatg
gccgatttcaacacgccctaccagtttctcgagacgatattgtccgggccgatgcagggg
cggcgcaaattgctctcccggcttagccatgcggcggtcgatccgctggacgaactgctg
gcgaccgccctggccttcgagcgggatcatatcccgaccttgcagggttttctcgactgg
ttcgaccgcggcgatgtcgaaatcaagcgcgagcaggtcgagggcggcaatgaagtgcgg
ctgatgaccgttcatggcgcaaagggattgcaggcgccgcttgtgatccttgccaatgcg
acctttgacccggcgagcaagaaaagcggcggtttcagcatcaaactgggcgaagggacc
ggtcgcgaactggaatatccggttgtcccggtccgcaaggccgagcgcgtcggcatattg
gctgaacatgccgcctatgccgacaaggtcgcgatggaagaacattggcggctgctctac
gtcgcgatgacccgcgcggaagaacatctggtcgttgccggcgtgctcggacccagagcg
aaaggcgaagtgccggaactgagctggtatggggcgatggagcgcggtctgacggccttg
ggcagcgaatggcgcgaagacccggactggcaggctgtgcgggaatatcggacggagagc
cggaacaggcccgctgcaccggcggctcccgaaagagccgctgacggggcaggggatcat
gtgccggcgccggactggctgttccgggctgctccggaagaatcccgcccgccgcgaccc
ttgaccccctcgcatctcggccccgacgatgccagcaatccgccgccggacctgaccatg
cgtgacgctgccgaacgcgggatattgttgcacagcctgtttcagcgcctgccgaatatc
gcgccggcgcgccggatggatgtcgccgaccgctggctggaaaagcagaagcagatcacc
gatccggcgcgccgcgcagagatcatccagacggtgctgacggtcatgggcaatccggcc
tggtcggcgcttttcgcgccggaaagtctcgcagaagcgccgatagccgcggtggtcggc
gaacatgtcatttccggcacggtcgaccgcctgctgatcaccgacgatcaaatctatgtc
gtcgatttcaagaccggccgccgggtgcccgacagtgccgaacaggcgcccgtcgcctat
ctgcgccagatggcggcctatgtcgccgcgctggaaaagatattcccggatcgttcgatc
aaggccgggctgctctattcgcacggcccgcaaatgctggaactggccccggatctgatc
gagcggcacaagccgggctttgagccgatatga

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