KEGG   Sphingobacterium sp. CZ-2: E3D81_11400
Entry
E3D81_11400       CDS       T06166                                 
Name
(GenBank) pseudouridine synthase
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
sphz  Sphingobacterium sp. CZ-2
Brite
KEGG Orthology (KO) [BR:sphz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sphz03009]
    E3D81_11400
Enzymes [BR:sphz01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     E3D81_11400
Ribosome biogenesis [BR:sphz03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    E3D81_11400
SSDB
Motif
Pfam: PseudoU_synth_2 S4 DUF6831
Other DBs
NCBI-ProteinID: QBR12732
UniProt: A0A4P7DYQ6
Position
complement(2572598..2574043)
AA seq 481 aa
MPFSSNRNSRDDKSRKNRSNSESFGDRKRSDKGSFNAKRDSNRNSSDNFRNNDRDQKFGR
SDNRDGGFKKFDRSEGGFKKFDKSEGGFKKFDKSEGRDSGFKKFDRDKKFDRSEGRDRSE
GGFKKFDKSEGGFKKFDRSEGRESGFKKFDRDKKFDRSEGRDRSEGGFKKFDRSEGRDSG
FKKFDRDKKFDRSEGRDRSEGGYKKFDRDSKFSGKREDRGDRKTTYRTRKPAQERSFAEP
EDDGLIRLNRYIANSGICSRRKADELIEAGVISVNGVAVTELGTKVDPAKDEIRYNDERL
KREKMVYVLLNKPKDYITTTDDPQERKTVMQLVSKATKERIYPVGRLDRNTTGLLLLTND
GNLAEKLSHPRNNISKIYNVELDKSLTQGDFNKIQFGVELEDGFVKPDDLSYVMGASKRE
VGIQIHSGKNRIVRRIFESLGYDVVKLDRVVYANLTKKDLPRGRWRYLDDKEIIQLKHLM
K
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgccatttagtagcaacaggaacagtcgagacgacaagtccagaaaaaacagaagcaac
tcagaaagcttcggagaccgtaaaagatccgataaaggttcttttaacgcaaaaagagat
tccaaccgtaattcatccgacaatttccgtaacaacgatagagaccaaaaatttggccgc
tccgataaccgtgatggaggattcaagaaattcgatcgttcggaaggaggatttaagaaa
tttgataaatctgaaggtggatttaaaaagtttgataaatcagaaggtagagattcaggt
ttcaagaaattcgaccgcgataagaaatttgatcgttccgaaggtagagatcgctcagaa
ggaggattcaagaagtttgataaatctgaaggaggattcaagaaatttgatcgttcggaa
ggaagagaatcaggtttcaagaaattcgaccgtgataagaaatttgatcgttccgaagga
agagaccgttcggaaggaggattcaagaaatttgatcgttccgaaggaagagattcaggt
ttcaagaaattcgaccgggataagaaattcgaccgttcagaaggaagagatcgttctgaa
ggtgggtataagaaatttgacagagacagtaaattttctggaaagcgcgaagatcgtggc
gacagaaaaacaacttatagaacaagaaaacctgcgcaagagcgttcattcgctgagcct
gaagatgatggcttgatccgtttgaaccgttatattgccaattcaggtatttgttcacgc
cgtaaagcggatgaattgatcgaagccggtgtaatttctgtgaacggtgttgccgtaacg
gaattaggtaccaaggtagatcctgcaaaagacgaaatcagatacaatgatgagcgtttg
aagcgtgagaaaatggtctatgtgttattgaataaaccaaaggactatattaccaccacg
gatgatcctcaggagcgcaaaacagtgatgcaattggtatccaaagcgaccaaggaaaga
atctatccggttgggcgtttggatagaaataccacaggattgctgttgttgaccaatgac
ggaaacctggcggaaaaattatcccacccaagaaataacatcagcaagatctacaatgtg
gagttggataagagccttacacaaggtgatttcaataagatccaattcggtgtggaactg
gaagatggttttgtgaaacctgatgatctgagttatgtaatgggtgcttccaaacgtgaa
gtaggcattcagatccactctggtaaaaaccgtatcgttcgtcgtatattcgaatcttta
ggttatgatgtggttaaattggaccgtgtggtctatgcgaacctgaccaaaaaagatctt
cctcgcggacgttggagatacttggatgataaagaaatcatacagttgaaacacttaatg
aaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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