KEGG   Spirosoma aureum: G8759_06755
Entry
G8759_06755       CDS       T06520                                 
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
  KO
K03274  ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
Organism
spib  Spirosoma aureum
Pathway
spib00540  Lipopolysaccharide biosynthesis
spib01100  Metabolic pathways
spib01250  Biosynthesis of nucleotide sugars
Module
spib_M00064  ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:spib00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    G8759_06755 (rfaD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:spib01005]
    G8759_06755 (rfaD)
Enzymes [BR:spib01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.20  ADP-glyceromanno-heptose 6-epimerase
     G8759_06755 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:spib01005]
 Core region
  G8759_06755 (rfaD)
SSDB
Motif
Pfam: Epimerase GDP_Man_Dehyd 3Beta_HSD RmlD_sub_bind NAD_binding_4 Polysacc_synt_2
Other DBs
NCBI-ProteinID: QIP12346
UniProt: A0A6G9AJ53
Position
complement(1673414..1674379)
AA seq 321 aa
MIIVTGAAGFIGSCLISKLNQENFNFIIAVDDFSDPRKEANLTGKRIQERVDREEFFGWL
DNNYQEVEFIFHIGARTDTTEFDRQIFEHLNVEYSKQIWNRCIDYQIPLVYASSAATYGM
GEFGYDDNESIIPQLKPLNPYGDSKNEFDIWALEQERKPFFWAGLKFFNVYGPNEYHKDR
MASVIYHAYNQICQSGHMRLFRSHNPDYTDGGQMRDFIYVKDVIEVCSFLMHHRRNSGIY
NLGSGKARTFLDLATLTFRAMDRDPQIEFIDTPVDIRDKYQYFTQANMAKLRSIGYDRPF
HSLEEGVSDYVKKYLKEGKYL
NT seq 966 nt   +upstreamnt  +downstreamnt
atgattattgttacgggggccgctggctttatcggaagctgtttgatcagcaaattgaat
caggaaaatttcaattttatcattgctgtcgatgatttttcggaccctcgtaaagaagca
aatctgactgggaaacggattcaggaacgcgttgaccgggaagagtttttcggctggctc
gacaacaattatcaggaggtggaatttatttttcacatcggtgcccgcaccgataccacc
gaatttgaccgccagatttttgagcatctgaacgttgagtattccaagcaaatctggaat
cgctgtattgattatcagattcccctcgtatatgcgtcatcggcagcaacttatggtatg
ggcgagtttgggtatgatgataatgagtcgatcattccgcagttgaagccgctcaatccg
tacggtgattcaaagaatgaatttgatatctgggcactggagcaggaacgtaaacccttt
ttctgggctggactgaaatttttcaacgtctacgggcccaatgaatatcataaagaccgt
atggcatcggtaatttaccatgcctacaaccagatttgccaatccggtcacatgaggctg
ttccggtcacataaccctgattataccgacggtggacagatgcgtgatttcatttacgtg
aaagacgtaatcgaagtttgttcatttctgatgcatcaccgacgcaattcaggtatctac
aacctcggaagtggcaaagcccgtacattcctcgatctggcgacacttactttccgggct
atggatcgcgatccgcagatcgagtttatcgatacccccgtcgatatccgcgataaatac
cagtattttacgcaggccaacatggctaagcttcgttctattggttatgacaggccattc
cattcgctcgaagaaggcgtttctgattacgtaaaaaaatacctcaaagaaggaaagtat
ctctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (21)   

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