KEGG   Stylophora pistillata (Smooth Cauliflower Coral): 111343520
Entry
111343520         CDS       T05774                                 
Name
(RefSeq) collagen alpha-1(I) chain-like isoform X1
  KO
K19721  collagen type V/XI/XXIV/XXVII, alpha
Organism
spis  Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:spis00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    111343520
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:spis00536]
    111343520
Glycosaminoglycan binding proteins [BR:spis00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   111343520
SSDB
Motif
Pfam: Collagen Endostatin Collagen_trimer DUF1554
Other DBs
NCBI-GeneID: 111343520
NCBI-ProteinID: XP_022806444
EnsemblRapid: LOC111343520
Position
Unknown
AA seq 1240 aa
MKGKKGERGEMGPRGTRGRTGRPGPALFFDASESVITVKGEKGDPGPEYTFVKEINCEKD
KCGLYIQGPKGEPGKNGNRGTPGTVGLPGPPGTPGKPGVILDPVTGLPVDPPKGEKGYPG
MDGMDGRKGEPGERGERGVIGPPGPKGKRGANGMTGFPGMTGAPGAMGLPGMGMPGPRGT
PGQDGAKGKQGDKGQMGDRGIQGPKGMDGPMGDDGLPGPPGPKGSKGNSIIGPPGPPGPP
GPKGDASMMEVVLRPEKGEQGLPGPPGPPGKSGTIGGVEGEPGAKGERGADGKNGTKGQK
GDAGGSPGRQGAKGEKGDSGDSCNCNFTKGDIGPVGPKGSPGPPGLPGNNGTSERGEKGD
KGEPGLKGEKGKRGSLGFPGLRGKKGSEGEVGPQGPVGELGERGQKGEQGSQGGNGSKGE
KGDRGVGLKGEAGEPGETGPQGPPGPPGPIVPSATEKGSKGEEGKNGTQGERGPQGEKGK
QGGIGFPGRKGATGRPGPIGFPGRKGEPGARGSIGEGVPGAEGPAGQKGETGSKGDQGKR
GTIGFPGSKGLKGTKGDAGRNGTDGQKGEPGESIQGPSGPPGPPGPPGVIMESSSGGESS
AQITAQKGDKGDIGRIGFPGKKGEKGSSGEQGVKGEKGEVGQDGKTGGLGFPGRKGDPGE
KGKRGFNGTTGPQGITGPPGNPGEMGRQGPIGFPGRKGNTGTPGPPGPPGPPGTPGDKGD
PGEEAAIGSTEGVNGNGSEAKGEKGDQGEVGEPGPPGEKGTNGTNGIKGEKGEQGVGEKG
QKGDNGITGNKGGPGERGVKGTKGEPGLQGKQGPEGPEGPEGPPGETGEPGDPGETGNTG
QKGQKGESGDNGMNGEPGQAGKDGVNGTKGSKGQRGDLGFPGLRGTPGSKGEAGTQGLQG
PKGEPGNSSVGPMGPQGPLGNPGNPGPPGPPGISGPSGTPGKDSNVSGPPGPPGPPGPPG
ENAEIGFTSGKTENSGVLVFDTQVNLIRDVEKVEQGTLAFVISDQMLYIRALRGWRSITL
GPTIFAGPTEASQTTKLSTIKPPTGLMLSPANVKLRGPYVRMIALNAPQTGEMRSVKGVD
EMCWRQSRAANLTGAYRAFISNTLQHVYSIIHRRDRNLPVGNLQGDQLFPSWNSLFKSRY
AFNPDIPLYSFNGSNVLKDPAWPLKHIWHGSRKDGHKYPLNCRRWMSSRSRDSSTASALN
GRELALAEREFPCSSDLVVLCVHINPTLRHRYRSRHKKVL
NT seq 3723 nt   +upstreamnt  +downstreamnt
atgaaaggaaagaaaggtgaacgtggggaaatgggaccaagaggtactcgaggtcgaacg
gggagacctggacccgcactattctttgatgctagcgaaagtgtgatcactgtcaaggga
gaaaagggagacccgggaccggagtatacctttgtaaaggaaataaactgcgaaaaggat
aaatgtggcctatacatccaaggtccaaagggagaacccgggaaaaacggtaaccggggt
accccaggaactgtggggttgcccggtccgccgggaacccctggaaaacctggagtaata
cttgatccagtgacaggattgcctgttgatcccccaaagggtgaaaaaggttacccagga
atggatgggatggacggacggaagggggagcccggagagagaggagagcgaggagtaatt
ggtcctcctggaccaaagggcaaaagaggggctaatggaatgacgggttttcccgggatg
actggggcaccaggagccatgggactgccaggcatgggtatgccagggccgcgaggtacc
ccgggacaagatggtgcaaaaggaaaacaaggcgataagggtcaaatgggcgatcgaggt
attcagggtccaaaaggaatggatggcccaatgggagatgatggacttccggggcccccc
ggaccgaagggctctaaaggaaacagtattataggcccaccaggtccaccaggacccccg
gggcccaaaggggacgcgtccatgatggaggtggttcttagacccgagaaaggggaacaa
ggacttccgggtccaccgggacctccagggaaatcaggtacaatcgggggcgttgaagga
gaacctggagcaaagggcgaaagaggtgctgatggaaagaatggaactaaaggacaaaaa
ggagatgctggaggctcccccggacgtcaaggtgctaaaggtgaaaaaggcgatagtgga
gattcttgtaattgtaactttaccaaaggagacatcggacctgtgggtcctaagggatcg
cccggtcctcccgggttgcctggcaacaatggaacgagtgaaagaggggagaaaggagac
aagggggaacctggacttaaaggagaaaagggtaaacgtgggtctttaggctttcctgga
cttagagggaaaaaaggatcagagggagaagtgggaccgcaaggacctgtgggagagcta
ggagagcgaggtcagaagggggaacagggatcccaaggaggaaacggttcgaaaggagaa
aagggtgaccgtggcgttggactcaaaggtgaagcaggtgagcctggggagactggtcct
caaggcccgccaggacctcccggtccaatcgtcccatcagccaccgaaaagggaagcaag
ggagaggaaggaaaaaacggcacacaaggagaacgaggaccgcagggcgaaaaaggcaag
caaggcggtatcggtttccctggaagaaagggtgccacaggaagaccaggcccgattgga
tttcctggcaggaaaggtgaaccaggcgctcgaggctctattggtgagggagtgcccgga
gccgaaggtcccgcgggacaaaagggtgagacgggatccaaaggagaccagggaaaacgt
ggaaccattggatttccaggttcgaaaggcttaaaaggcactaagggtgatgcggggaga
aatggaactgatgggcagaagggagagcctggtgaaagcatccaaggaccatctgggcct
cccgggcctccggggccccctggtgtaataatggagtcgagcagtggaggagaatcatca
gctcagattacagcgcaaaagggcgacaagggggatattggcaggattgggtttcctggc
aagaaaggggaaaagggaagttccggggaacaaggtgtcaaaggagagaaaggggaagtg
ggacaggacggaaaaaccggaggattgggattcccagggagaaaaggggacccgggggaa
aagggaaagcgtggatttaatggaacaacgggacctcagggcattacgggtccgcccggt
aatccaggggaaatgggacgacaggggccgattggtttccctggacgtaaaggaaacacg
ggtactccaggaccccccgggcccccgggacctccaggaacccctggagacaagggagac
cctggtgaagaggctgcgatcggatccaccgaaggagtgaatggtaatggaagcgaggct
aaaggagagaagggggatcaaggcgaggttggcgaaccaggtcctccgggagaaaaagga
acaaacggaaccaatgggataaaaggagaaaagggggaacaaggagttggtgagaagggt
caaaaaggcgataatggcatcactggaaacaagggagggccaggagaaagaggtgtaaag
gggaccaaaggagaaccagggctccagggaaaacaggggcctgaaggtcctgaaggtcct
gaaggtcccccgggggaaactggtgaaccaggagatccgggggagacaggaaatacagga
caaaaaggacaaaaaggggagagcggagacaatgggatgaacggagaacctggacaggca
gggaaagatggagtcaacggaaccaaaggaagtaagggtcaaagaggcgacctaggtttc
cccggactcagaggtacaccaggaagcaagggagaagcgggaacacaaggattgcaagga
ccaaagggagagccaggaaattcaagtgtaggacctatgggaccgcaaggaccgctggga
aatcctggcaacccaggccctccgggaccacccggaatatccggtccttccgggaccccg
gggaaagatagcaatgtttctggtcctccggggccaccgggacctccaggaccccctgga
gaaaatgcagagattggcttcactagtggaaaaactgaaaattcaggggtgctggtattt
gatacacaagtcaatcttatccgtgatgtagagaaagtagaacaaggcactctggctttt
gtcatctccgaccagatgttatatataagagctttacgcggctggagatcgatcacgctt
ggcccaaccatcttcgcgggtccaacagaggcttcccaaacaacgaaattatccactatc
aagcctcctacgggtctcatgttatctccagcaaacgtcaaactacgaggaccatatgtg
cgcatgatcgccctcaatgcaccgcagactggtgagatgcgcagcgtgaagggtgtggat
gaaatgtgctggcggcagtcccgtgcagctaatctaacaggagcatatcgagcttttatt
tcaaacacgctgcaacatgtctattcaattatccacagaagggacagaaatctccctgtt
ggtaaccttcagggagatcagctttttccttcttggaattccttattcaagtcacgatat
gcatttaatcctgatatcccactctattcattcaatggatcaaacgttctaaaagaccca
gcctggcccctcaagcacatttggcacggatcgcgaaaagatggccacaagtacccatta
aattgtcggcgctggatgagcagtcgctccagggactccagtacggcctcggccttgaat
ggccgcgagctagctttggccgagcgcgaatttccttgcagcagtgatctagtggtgctg
tgtgtgcatataaaccccacactacgccaccgatacagatctcgccataaaaaggttttg
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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