KEGG   Spiribacter sp. 2438: GJ672_05735
Entry
GJ672_05735       CDS       T06294                                 
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
  KO
K03583  exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
Organism
spiz  Spiribacter sp. 2438
Pathway
spiz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:spiz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    GJ672_05735 (recC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spiz03400]
    GJ672_05735 (recC)
Enzymes [BR:spiz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     GJ672_05735 (recC)
DNA repair and recombination proteins [BR:spiz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     GJ672_05735 (recC)
SSDB
Motif
Pfam: Exonuc_V_gamma RecC_C
Other DBs
NCBI-ProteinID: QGM21809
UniProt: A0A6B8JQM0
Position
1148165..1151617
AA seq 1150 aa
MDNAFPPGFAQIHGNRLEALRDLAVSHLREHPLDPLEHETLLIQSNGMAQWLKLAFARGG
IAAAQRFVLPQSFLWQSYRTVLGPGEVPETSPFDKHRLQWRIYRLLPGLLDAEPGTFAPL
ASFLAGDDDQRKRHSLARRLADLFDQYQVYRPDWLADWLEGRDQLRRARHELVTLAPDQC
WQPALWRALHADMGELARNLSRPGIQEQFIAALDAAEPGAFPALPRRITVFGINSMPRPV
LEALHALSRHTQILQLIQNPSGYFWADLIEDRELLKLDHQRHPRQSGTPGHPLLAAWGKQ
GRDFIGLLAELDQPERYRHWFQSIDLFEPPIKETDDVAAAPILQQLQQDIYELTPLPAPG
DERPLSQDRSIRFHRAHSRQREVEVLQDRLLDAFARADAAGEPLRPRDIIVMVPDVDVYA
PAVEAVFGTLDPRDKRYIPYTIGDRRSRSEAPVAAAVARLCDLPNARLTLGDVLDLLEVA
PFRRRFGLAADDLVLLRRWCSAAGVRWGLDSRQRQQLDLDTEFEQNSWRFGLRRLLLGYA
VGTGEAWQAIEPFPEVGSLDAALLGPLRALLDTLEAQLHALQQPGRPRDWVQRVETLLDD
CFALESNEDLALEARINNALQEWLNACDEADFDEAIPLAVARDAWLGALDDEGPAQRFLA
GRVNICTMMPMRSIPFRMVCLLGMNEGEYPRTKPPADFDLMARPGQYRPGDRSGREDDRF
LFLEALLAAREHLHISWIGRSARDDSEQPPSVLVSQLRDHLDRGWRVENHDQSRRASAAL
TVDHPLQPFSATYNDEGEHFTYTHEWARSVESLSSATASAALPPPALSDPQVLSLNDLKE
FLRDPPKHFLSERLKLRFDASRDTTSETEPFELGGLDAYQAQERLLAPLRRDSMPTDSTA
AITRAGQSLQRSGQLPVGGLGQRALADLTGQARQAAGRWQAWMDQNPTAEPPRELRLSRQ
VRNQAFVIEDWTRDLYRLADGHRVRLVLKSGDTIKKGKPHYPRLLEDWLVHLATNAAGIE
SDTVIVAHDAEQRLTALAADEAGGLLDAVLAGWLAGLEQPLPLAERTAFGHLTQGRDQPL
TVDSLSSSYEGPPGQTGEVGYDSNGALRRCYPDAASLLAPRNDDGEPLFAHWAHQLYQPL
VDQLAPEDEP
NT seq 3453 nt   +upstreamnt  +downstreamnt
atggacaacgcttttcccccgggctttgcccaaattcatggcaatcggcttgaggctctc
cgcgatctggcggtgagtcatttgcgtgagcatccgctggatcccctggagcacgagacc
ctgctgatccagtccaacggcatggcgcagtggctcaaactggcgtttgcccggggcggc
attgccgccgctcagcgcttcgtgctgccccagtcgtttctctggcagtcctaccgcacg
gtgctggggcctggcgaggtcccggagacctcgcccttcgacaagcaccgcctgcagtgg
cgcatttatcggctgctgcccgggctgctcgacgcggagcctggcaccttcgcgccgctg
gcgagttttctggcgggggatgacgatcaacgcaagcgccactccctcgcccgccgactg
gcggatctcttcgatcagtatcaggtctaccggccggactggctggcggactggctggag
ggccgggatcagctgcgccgggcgcgtcacgaactcgtcacgctggccccggaccagtgc
tggcagcccgcactgtggcgagccctccacgccgacatgggggaattggcccgcaacctc
tcccggcccgggattcaggagcagttcattgcggcactggacgccgccgagcccggtgcc
tttcccgccctgccccggcgcatcacggtgtttgggattaattccatgccccggccggtg
ctggaagcgctgcatgccctgtcccgtcacacccagatcctgcagctcattcagaacccg
tcgggctacttctgggcggacctcatcgaagaccgggagcttctcaagctggaccaccag
cggcatccccgccagtccggcacaccgggacaccccctgctggccgcctggggcaagcag
ggccgcgactttatcggcctgctcgccgagctggaccagcccgagcgttatcggcactgg
tttcagtccatcgacctgttcgaaccgccgattaaagaaaccgacgacgtcgccgcggcg
ccgatcctgcaacaactccagcaggacatctacgagctcacaccgctgccggcccccggg
gatgagcgccccctgagccaggaccgttccattcgctttcaccgggcccacagccgccag
cgggaggtggaggtgctccaggatcgcctgcttgacgccttcgcccgggccgacgccgcc
ggcgagcccctgcggccgcgggacatcatcgtcatggtccccgacgtggacgtctatgcg
ccggcggtggaagcggtttttggcaccctcgacccccgggataaacgctatatcccttac
accatcggtgaccggcgcagtcgcagtgaagccccagtggcggcggccgtcgccaggctc
tgtgacctgcccaacgcccggctcacgctgggggatgtactggatctgctggaggtggcg
ccctttcgacgccggtttggactggccgccgatgacctggtcctgctgcggcggtggtgc
agcgccgccggggtccgctgggggctggacagccgccagcgccagcaactcgacctcgac
actgaatttgaacagaacagctggcgctttggactgcgtcgcctgctgctgggctatgcg
gtgggcaccggagaggcctggcaggccatcgaacccttccccgaggtgggcagcctggac
gccgccctgctcgggcccctgcgggcgctgctggacaccctcgaggcccagcttcacgcc
ctacagcaacccggccggccccgggactgggtgcagcgcgtggagaccctgctcgacgac
tgcttcgcgctcgagagcaacgaggacctggcccttgaggcgcgcattaacaacgccctt
caggaatggctcaatgcctgtgacgaagcggattttgatgaggccatcccgctggccgtg
gcccgcgacgcctggcttggcgcactggatgacgaaggcccggcgcagcgcttcctggcc
ggccgggtgaacatctgcaccatgatgcccatgcgcagcattccctttcggatggtttgc
ctgctgggcatgaacgagggcgagtacccgcgcaccaagcccccggcggatttcgatctc
atggcccggcccggccagtaccggcccggcgatcgctccggccgcgaggacgaccgcttc
ctctttctcgaggcgctactggccgcccgtgagcacctgcacatcagctggattggccgc
agtgcccgggacgacagcgagcagcccccgtcggtgctggtcagtcagctgcgggatcat
ctggaccggggctggcgggtcgagaaccatgaccaatcccgccgcgccagcgccgcgctc
accgtggatcatccgcttcagcccttcagcgcgacctacaacgatgaaggcgagcatttt
acttacacccacgagtgggcacggtccgtggagtcgctctcgtccgccaccgcgtccgcc
gccctgcccccgccggcgctctccgacccgcaggtcctgagcctgaatgacctcaaggag
tttctgcgggatccccccaagcatttcctctccgagcgcctgaaactgcgttttgacgcc
agccgggacacgacttcggagaccgagcccttcgaactgggcggactggacgcttaccag
gcgcaggaacgcctgctcgcgccgctgcgccgcgactcgatgccgactgacagcaccgcg
gccatcacccgggccggccagtcgctgcagcgcagcggtcaactgccggtgggcggactg
ggtcagcgggcgctggccgacctgaccggccaggcacgacaggcggcggggcgctggcaa
gcctggatggatcaaaatcccaccgccgagccaccccgtgagctgcgtctgtcacgacag
gtccgaaatcaggcctttgtcatcgaggactggacccgcgatctctaccggctggccgat
ggccaccgggtgcgactggtgctgaaatccggcgacaccatcaaaaagggaaaaccccac
tatccgcgactgctggaagactggctggtgcatctggccaccaacgccgctggcattgag
agtgacaccgtcatcgtggcccacgacgctgaacagcgcctcaccgccctcgccgccgat
gaagccggcgggttgctggacgcggtactcgctggctggctggccgggctggagcaaccg
ctgccgctggcggagcgcacggcatttgggcacctcacccaggggcgcgaccagcctctc
accgtggacagcctgtcatcgtcctacgagggccctcccgggcagaccggcgaagtgggc
tacgacagcaacggcgccctgcgccgctgttacccggacgctgcgtcgctactggccccc
cggaatgacgacggcgaaccgcttttcgcccactgggcccaccagctgtaccagccactg
gtggaccagcttgccccggaggatgagccatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system