KEGG   Streptococcus pyogenes MGAS2096 (serotype M12): MGAS2096_Spy0086
Entry
MGAS2096_Spy0086  CDS       T00357                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase beta chain
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
spj  Streptococcus pyogenes MGAS2096 (serotype M12)
Pathway
spj03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:spj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MGAS2096_Spy0086 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spj03021]
    MGAS2096_Spy0086 (rpoB)
   03400 DNA repair and recombination proteins [BR:spj03400]
    MGAS2096_Spy0086 (rpoB)
Enzymes [BR:spj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     MGAS2096_Spy0086 (rpoB)
Transcription machinery [BR:spj03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     MGAS2096_Spy0086 (rpoB)
DNA repair and recombination proteins [BR:spj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      MGAS2096_Spy0086 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1 RNA_pol_Rpb2_45 Peptidase_M23
Other DBs
NCBI-ProteinID: ABF35138
UniProt: Q1JE20
Position
93930..97496
AA seq 1188 aa
MAGHEVRYGKHRTRRSFSRIKEVLDLPNLIEIQTDSFQDFLDSGLKEVFEDVLPISNFTD
TMELEFVGYEFKEPKYTLEEARIHDASYSAPIFVTFRLVNKETGEIKTQEVFFGDFPIMT
EMGTFIINGGERIIVSQLVRSPGVYFNDKVDKNGKVGYGSTVIPNRGAWLELETDSKDIA
YTRIDRTRKIPFTTLVRALGFSGDDEIVDIFGESDLVRNTIEKDIHKNPSDSRTDEALKE
IYERLRPGEPKTADSSRSLLIARFFDARRYDLAAVGRYKVNKKLNIKTRLLNQIIAENLV
DAETGEILVEAGTEMTRSVIESIEEHLDGDLNKFVYTPNDYAVVTEPVVLQKFKVVSPID
PDRVVTIVGNANPDDKVRALTPADILAEMSYFLNLAEGLGKVDDIDHLGNRRIRAVGELL
ANQFRIGLARMERNVRERMSVQDNDVLTPQQIINIRPVTAAVKEFFGSSQLSQFMDQHNP
LSELSHKRRLSALGPGGLTRDRAGYEVRDVHYTHYGRMCPIETPEGPNIGLINNLSSFGH
LNKYGFIQTPYRKVDRATGRVTNEIVWLTADEEDEYTVAQANSKLNEDGTFAEEIVMGRH
QGNNQEFSASVVDFVDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLIDPKAP
YVGTGMEYQAAHDSGAAVIAQHNGKVVFSDAEKVEIRRQDGSLDVYHITKFRRSNSGTAY
NQRTLVKVGDIVEKGDFIADGPSMENGEMALGQNPVVAYMTWEGYNFEDAVIMSERLVKE
DVYTSVHLEEFESETRDTKLGPEEITREIPNVGEEALKDLDEMGIIRIGAEVKEGDILVG
KVTPKGEKDLSAEERLLHAIFGDKSREVRDTSLRVPHGGDGIVRDVKIFTRANGDELQSG
VNMLVRVYIAQKRKIKVGDKMAGRHGNKGVVSRIVPVEDMPYLPDGTPVDIMLNPLGVPS
RMNIGQVMELHLGMAARNLGIHIATPVFDGASSEDLWDTVREAGMDSDAKTVLYDGRTGE
PFDNRVSVGVMYMIKLHHMVDDKLHARSVGPYSLVTQQPLGGKAQFGGQRFGEMEVWALE
AYGASNVLQEILTYKSDDVTGRLKAYEAITKGKPIPKPGVPESFRVLVKELQSLGLDMRV
LDEDDNEVELRDLDEGEDDDIMHVDDLEKAREKQAQETQEVSETTDEK
NT seq 3567 nt   +upstreamnt  +downstreamnt
ttggcaggacatgaagttcgatacggaaaacaccgtacacgtcgtagcttttcaagaatc
aaagaagttcttgatttaccaaatttgattgaaattcaaactgactcattccaagatttc
ctcgattcaggtttgaaagaagtatttgaagatgtacttcctatttcaaactttacggat
actatggaacttgaatttgttggttacgaatttaaagaacctaaatatacccttgaagaa
gctcgtatccacgatgcaagttattctgcaccaatctttgttaccttccgtttggtcaat
aaagaaactggtgagattaaaactcaagaagtcttctttggtgatttcccaatcatgacg
gaaatgggtacctttattatcaatggtggtgaacgtatcatcgtttctcagttggtgcgt
tctccaggtgtttatttcaacgataaagttgataaaaacggtaaagttggttacggatca
acagtgattcctaaccgtggggcttggttggaattagagactgactcaaaagacattgcc
tacactcgtattgaccgtacccgtaagattccattcacaaccttggttcgtgcccttggt
ttctcaggtgatgatgaaattgttgatatctttggtgaaagcgaccttgttcgtaatacc
attgaaaaagacattcacaaaaatccaagtgattctcgtacagacgaagcccttaaagaa
atttacgagcgtcttcgtccaggtgagccaaaaactgcagatagctctcgtagtcttttg
attgcgcgtttctttgatgcacgtcgttacgatttggctgcggttggtcgttacaaagtg
aacaaaaaacttaatatcaagactcgtcttttgaaccaaatcattgctgaaaaccttgtg
gatgctgaaactggcgaaattttggtagaagctggaactgagatgactcgtagcgtcatc
gaatccatcgaagaacaccttgacggtgatttgaacaagtttgtttacacaccaaatgat
tacgctgtggttactgaacctgttgttcttcaaaagttcaaggttgtgtcaccaattgat
cctgatcgtgtagtaactattgttggtaatgccaatccagatgacaaggttcgtgcattg
acacctgctgatattttggcagaaatgtcttacttcttgaaccttgcagaaggtcttgga
aaagttgacgatattgaccacttaggtaaccgtcgtatccgtgccgttggtgaattgctt
gccaaccaattccgcatcggtcttgctcgtatggagcgtaacgttcgtgagcgtatgtct
gttcaagacaacgatgtgttaacaccacaacaaatcatcaatatccgtcctgtcacagca
gctgtcaaagaattcttcggttcgtctcagttgtcacaattcatggaccaacacaaccca
ttgtcagagttgtctcacaaacgtcgtttatctgccttaggacctggtggtttgacacgt
gaccgtgctggttatgaggttcgtgacgtgcattacacgcactatggccgtatgtgtccg
attgaaacacctgaaggaccaaacattggtttgattaacaacttgtcttcatttggacat
cttaataaatatggtttcatccaaacaccttaccgtaaggttgaccgtgcgactggtagg
gtaactaacgagattgtttggttgactgccgacgaagaagacgaatacacagttgcacag
gccaattcgaaactaaacgaagatggcacttttgctgaagaaatcgttatgggtcgtcac
caaggtaataaccaagaattttctgcaagtgttgttgatttcgttgacgtttcccctaaa
caggtagttgctgttgcgacggcatgtattcctttcttggaaaacgatgactccaaccgt
gccctcatgggtgccaacatgcaacgtcaggctgtgccattgattgatccaaaagcacca
tatgttggtactggtatggaatatcaagctgcccatgactcaggcgctgcggtgattgct
cagcacaatggtaaagttgtcttttctgatgctgaaaaagtggaaatccgtcgtcaagat
ggctcacttgatgtttaccacattaccaaattccgtcgttcaaactcaggaacagcctat
aaccaacgcacccttgttaaagtaggagacattgttgaaaaaggtgatttcatcgctgat
ggaccttctatggaaaatggtgaaatggctcttggacaaaacccagtcgttgcttacatg
acttgggaaggttataactttgaggatgccgttatcatgagtgagcgccttgtgaaagaa
gatgtctacacatctgttcacttggaagaattcgaatctgaaacgcgtgatacaaaactt
ggccctgaagaaatcactcgggaaatcccaaatgttggtgaagaagccctcaaagacctt
gacgaaatgggcattatccgtatcggtgctgaggtgaaagaaggcgacatcttagtaggt
aaagtcacacctaaaggtgaaaaagacctttctgctgaagaacgtttacttcacgccatc
tttggggataaatcgcgtgaagtgcgtgatacctcacttcgtgtccctcatggtggtgat
ggtattgttcgtgatgtgaaaatctttacacgcgctaacggcgatgaattgcaatcaggt
gttaatatgcttgtgcgtgtttacatcgctcaaaaacgtaaaatcaaggtcggagataaa
atggccggtcgtcacggaaacaagggtgtcgtttcacgtattgtaccagttgaagacatg
ccataccttccagacggaacaccagttgacatcatgttgaaccctctcggggtgccatca
cggatgaatattggtcaggttatggaacttcaccttggtatggctgctcgtaatcttggc
attcacattgcaacacctgtctttgacggggcttcatcagaagacctttgggacactgtt
cgtgaagctggcatggatagcgatgctaagacggtcctttatgatggtcgcaccggtgaa
ccatttgacaaccgtgtatccgttggtgtcatgtatatgatcaaacttcaccacatggtt
gatgataaacttcatgcccgttctgtaggaccatactcacttgttacccaacagccactt
ggtggtaaagctcaatttggtggacaacgttttggtgagatggaggtttgggcccttgaa
gcttatggtgcatcaaatgttcttcaagaaatcttgacctacaagtcagatgacgtcaca
ggacgtttgaaagcctatgaagcgattactaaaggtaaaccaattccaaaaccaggtgta
ccagaatccttccgtgttcttgtaaaagaattgcaatcgcttggtcttgatatgcgtgtg
cttgacgaggatgataatgaagtggaacttcgtgatcttgatgaaggtgaagacgatgat
attatgcatgttgacgatctcgagaaggcacgtgaaaaacaagctcaagaaacccaagaa
gtttctgaaacaactgacgaaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system