KEGG   Sphingomonas sp. KC8: KC8_04100
Entry
KC8_04100         CDS       T04987                                 
Name
(GenBank) type II secretion system protein D
  KO
K02453  general secretion pathway protein D
Organism
spkc  Sphingomonas sp. KC8
Pathway
spkc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:spkc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    KC8_04100
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:spkc02044]
    KC8_04100
Secretion system [BR:spkc02044]
 Type II secretion system
  General secretion pathway protein
   KC8_04100
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: ARS26473
UniProt: A0A1X9YCA4
Position
complement(852812..854986)
AA seq 724 aa
MKRLILVSALALALASPVPAQQMLNLRDADIRAFIQDAARVTGRTFIIDPRVQGKVSVVT
DKPLSRTEYLEVFLSTLRANGLVAVPTTGGAFRVQPVDTAATQPGRVGSRGSSSNSFVTE
VFRLQTIDATSATETIRPLVSREGSVTANRAGNAVVVADYADNIRRIRELISRIDRDSAT
TRVIALRNAGAREIAQSLQALAGAPRGGGGEGAATAGASVSVVAIDSSNSIALRGDPGTV
ARLSQIAEELDRRAASGSEIRVIFLEHADAGQLLPVLQQIVGQQVTPASGGGKRAAAGNA
SPAEESVAPASSAAAAPGRGQPVIARFEGANAIVVAATSDMQRTLGEVIRQLDTRREQVL
VEAIIVEISDNAARKLGVQFLLGGLKGSAIPFAATNYSNTAPSILSIAGAIGARELNTST
TTVNGNTTTTTTNNAVSDQLAQAAVNSILGAGGGFFGLGGQTNNGMIFGAIINAVRSDTE
SNILSTPSVMTLDNQEAKLLVGQEIPVTTGQALSNNFDNAFRTVQRQNVGVQLEVKPQIN
AGGAIKLFLRQEVSSIAGPVSNDNSELILNKREIETTVTVDDGEIIALGGLLDDNERKTI
ERIPLLSDIPGVGELFKSRSRSRTKTNLMVFIRPTIIRSAADARSVAGQRYGYIRDMQAM
QRPEREPTIDELVRDYMGAAPPRVPIAQPAASPSSVTPEIITPTVRSSTEVVRPVPVPPA
KEQK
NT seq 2175 nt   +upstreamnt  +downstreamnt
atgaagcgtttgattctggtttccgctttggcgctggcgctcgcgtcgccggtgccggcc
cagcagatgctgaacctgcgcgatgcggatattcgcgccttcattcaagacgccgcgcgc
gtcaccggtcgtaccttcattatcgatccccgcgttcagggtaaggtttcggtggttacc
gacaaaccgttgtcgcgtaccgaatatctggaggtgttcctgtccacgctgcgtgccaac
gggctggtcgcggtgccgacgacggggggcgcattccgggttcagccggtggacaccgct
gcaacccagccgggccgagtgggttcgcgcggcagttccagcaacagtttcgtgaccgaa
gtattccggcttcaaaccatcgatgcgacttcggcgacagaaaccatccgtccactcgtc
agccgtgaaggatcggtgacggccaatcgtgcgggcaatgctgtcgtcgtggccgattat
gccgacaatattcgtcgcattcgcgaactgatcagtcgtatcgatcgggattcggcgact
acgcgggtgattgcgctgcgcaatgccggtgcgcgcgaaatcgcccagtcgcttcaggcg
ctggctggtgcaccgcgtggcgggggaggcgagggggctgccactgccggggcatcggtt
tcggtggtggcgatcgacagttccaactcaatcgcgctcaggggcgatccgggtacggtt
gcgcggctttcccagatcgcggaagaactcgaccggcgggccgccagcggtagcgaaatc
cgtgtcatctttctcgaacatgccgatgccgggcagttgttgccggtgcttcagcagatc
gtcggccagcaggtgacgccggcatccggcggcggcaagagggcggccgccggcaatgca
tcgccggccgaggaatcggttgcccctgccagcagcgccgctgcggcgccggggcgaggc
cagccggtaatcgcccgcttcgaaggggccaatgcaatcgtcgtggcagccacaagcgat
atgcagcgcacattgggcgaggttatccgccaactcgatacgcgacgcgagcaggtgctg
gtcgaagcgatcatcgttgagatttccgataatgccgcgcgcaagcttggtgttcagttc
ctgcttggcggtttgaagggcagcgccatcccgttcgccgcaaccaattattcgaatact
gcgcccagtatcctgtcgatcgccggcgcgatcggcgcgcgcgaactcaacaccagcacg
acgaccgtgaacggcaacacaacgaccaccaccacgaataacgcggtgagcgatcagctg
gcccaggccgcggtcaattcgatcctcggggctggcggcggctttttcgggttgggcggg
cagaccaacaatggcatgatctttggcgcgatcatcaatgccgtgcgatcggatacggaa
tcgaacattctgtctacgccgtcagtgatgacgctggataatcaggaagccaagctgctc
gtcggtcaggaaattccggtgacgacgggacaagcgctgagcaataatttcgacaatgcc
tttcgcaccgttcagcgccagaatgtcggcgtccagctggaggtgaaaccccagatcaat
gccggcggggcgatcaagctgttcctgcggcaagaggtcagttcgatcgcgggtccggtt
tcgaacgacaatagcgaactgatcctcaacaagcgcgagatcgaaaccaccgtgacggtg
gatgatggcgaaatcatcgcgcttggtggcctgctggacgacaatgaacgcaagacgatc
gaacggattccgctgctcagcgatattcccggcgttggtgaattgttcaaatcccgatcg
cgttcacgcaccaagaccaatctgatggtgttcatccgtccgacgatcattcgcagtgcg
gcggatgcacgcagcgtcgccggccagcggtacggctacatccgcgacatgcaggccatg
caacggcccgaacgcgagccgaccatcgacgaactggtgcgcgattatatgggggctgcg
cctccgcgtgtcccgatcgcgcagccggcggcatcgccgtcgtcggtgacgccggaaatc
atcacgccgacggtgcgttcttcaaccgaagtggtccgcccggtgccggtgccgccggca
aaggagcaaaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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