KEGG   Shewanella pealeana: Spea_3988
Entry
Spea_3988         CDS       T00606                                 
Name
(GenBank) efflux transporter, RND family, MFP subunit
  KO
K07798  membrane fusion protein, copper/silver efflux system
Organism
spl  Shewanella pealeana
Pathway
spl02020  Two-component system
Brite
KEGG Orthology (KO) [BR:spl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Spea_3988
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:spl02000]
    Spea_3988
Transporters [BR:spl02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   Spea_3988
SSDB
Motif
Pfam: HlyD_D23 HMBD HlyD_3 Biotin_lipoyl_2 zf-C2H2_3 HlyD_D4 Biotin_lipoyl DUF4342 HlyD_2 PYNP_C
Other DBs
NCBI-ProteinID: ABV89298
UniProt: A8H9R1
Position
4842755..4844677
AA seq 640 aa
MSFFKPNKAATPLICAFSFMLVATPQQAYSQTAETTYQHAQAHQHESTYYCPMHPEVTSH
EPGRCPECKMFLVKDEEQDSSTHDNHATVTKSQDYYCPMHPEVTSHEPGRCPECKMFLVK
DEEQDSSNHDNHAAVSQNYYCPMHPEVTSHEPGRCPECKMFLVKDEEQDSSNHDNHAAVT
NEYYCPMHPEVTSHEPGRCPECKMFLVKEEEEESVPDEHAGHNHTTQSTSSTQQSQADKI
LSQPKPTLSPAAQSSGDGNVKYVCPMHPHVVSDVPGSCPICGMDLEKVTIGGVGEEVVVG
VSGGMQQALGMRSEQITEGTLWKLVKTIGTVEYNENAIGHSHTRVNGWIETLMVHNVGQR
VKKGQLLYELYSPELINAQDDYMQAVDYLTQDKSRGQGLLRKARLRLELLGVSSDTIKQL
ERTGKTIYRVPFYAEQDGFISKLTVRHGMYVQPGDTLFEIVDLSSVWVIADVFENEQSWL
EQGRPVEVTSAAQGLFDLESTIDYIYPELDPVSRAMRVRIKLDNPDKLLKPGTLVDVKLF
GGPKREVLAIPTEALILTGRENRVVVQRDDNRFASVPVKVGMIAQGKAEIIEGLKVGDKV
IVSGQFLLDSEASIQGSLQRLSGSNSSENNNAASDPHANH
NT seq 1923 nt   +upstreamnt  +downstreamnt
atgagtttttttaagccaaacaaagcggcgacgccgctgatctgcgcattcagttttatg
cttgtggctacgccacaacaggcatatagccaaactgcagaaacaacatatcaacacgct
caggcccaccagcatgagtcaacttactactgccccatgcatccggaagtgaccagccat
gagcccggtcgctgccctgagtgcaagatgttcttagttaaggacgaagagcaggacagt
tcgactcacgacaatcatgcaactgtaactaagagtcaagattactactgccccatgcat
ccggaagtgaccagccacgagcccggtcgctgccctgagtgcaagatgttcttagttaag
gatgaagaacaggacagttcaaatcacgacaatcatgcggctgtaagccagaattactac
tgcccgatgcatccagaagtgaccagccatgagcccggtcgctgccctgagtgcaagatg
ttcttagttaaggatgaagaacaggacagttcaaatcacgacaatcatgcagctgtcact
aatgagtactactgcccgatgcatccggaagtgaccagccatgagcccggtcgctgccct
gagtgcaagatgttcttggtgaaagaggaggaagaggagtctgtgcctgatgagcacgct
ggccataaccacacgactcaatcgacctcctcaactcagcagtctcaagcggataagatc
ctaagccaacctaagccgacactctcgcctgcagcccagagcagcggtgatggcaacgta
aaatatgtttgccccatgcatcctcacgtcgtctccgatgttcctggctcctgcccgata
tgcggcatggacctagagaaagtcaccataggcggcgtaggtgaagaagtggtcgttggt
gtatctggcggtatgcagcaagcattaggcatgcgcagcgagcaaatcaccgaaggcacc
ctttggaagctggtaaaaaccataggcacggtggagtataacgaaaacgccatcggccat
agccatacccgcgttaacggctggattgaaaccttaatggtgcataacgtcggccagcgg
gtgaagaaaggccaattactttatgagctttactctccagagctgattaatgcccaagac
gattatatgcaagcggtggactatctaacccaagacaaaagccgcggccaaggcttacta
cgcaaggcacgcttacgtcttgagttactgggtgtgagctccgacactatcaagcaatta
gaacgcacaggtaaaaccatctaccgtgtgcccttttatgccgagcaagatggctttatc
agcaagctaaccgtacgtcatggcatgtatgtgcagcccggcgataccttgtttgaaatc
gtcgatttaagcagtgtatgggtgattgccgacgtatttgaaaatgaacagagctggctc
gaacagggtcgtcctgtagaagtcacctctgctgctcaagggctattcgatctcgagtcg
actatcgactatatctaccctgagcttgaccctgtatcccgtgcaatgcgcgtgcggatt
aaactagacaatcccgataaactgctcaaacccggtaccttggtcgatgtaaaactcttc
ggtggccctaaacgtgaagttctggcgatcccaactgaagcgcttattcttactggccgc
gaaaaccgagtcgtagtgcagcgtgatgataaccgctttgcttctgtgcccgtaaaagtg
ggcatgattgcccaaggcaaggctgagattatcgaaggcctaaaggttggcgacaaggta
attgtttctggtcagttcttattagactcggaagccagtatccagggtagcttacagcgc
ttaagcggtagcaatagtagcgaaaacaataacgctgctagcgatccacacgcaaaccat
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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