KEGG   Sphingomonas sp. LK11: AV944_01835
Entry
AV944_01835       CDS       T04954                                 
Name
(GenBank) single-stranded DNA-binding protein
  KO
K03111  single-strand DNA-binding protein
Organism
splk  Sphingomonas sp. LK11
Pathway
splk03030  DNA replication
splk03430  Mismatch repair
splk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:splk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AV944_01835
   03430 Mismatch repair
    AV944_01835
   03440 Homologous recombination
    AV944_01835
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:splk03032]
    AV944_01835
   03400 DNA repair and recombination proteins [BR:splk03400]
    AV944_01835
   03029 Mitochondrial biogenesis [BR:splk03029]
    AV944_01835
DNA replication proteins [BR:splk03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    AV944_01835
DNA repair and recombination proteins [BR:splk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     AV944_01835
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    AV944_01835
Mitochondrial biogenesis [BR:splk03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    AV944_01835
SSDB
Motif
Pfam: SSB
Other DBs
NCBI-ProteinID: APX64799
Position
376755..377366
AA seq 203 aa
MAGSVNKVILVGNLGRDPESRSFQNGGKVVELRIATSESWKDRNSGERKEKTEWHTVKIF
NEGLANVAERFLRKGSKVYIEGALTTRKWQDQQGNDRYSTEVTLQGFNSVLTMLDGPGGG
QGGGGGGRGGSDFGGGDDFGGGDFGGGSSGFGGGSSGGGYGGGSRGGSGNQSGGGNHSGN
GGNRGGFGQGGGFADDLDDDVPF
NT seq 612 nt   +upstreamnt  +downstreamnt
atggcgggcagcgtcaacaaggtgattctcgtcggcaatctgggacgcgatcccgagagc
cgctccttccagaatggcggcaaggtggtcgagctgcgcatcgccacgtcggaatcgtgg
aaggaccgcaacagcggcgagcgcaaggaaaagaccgagtggcacacggtcaagatcttc
aacgagggtctggccaatgtcgccgagcgcttcctgcgcaagggctccaaggtgtacatc
gagggcgcgctgaccacccgcaagtggcaggaccagcagggtaacgatcgttactcgacc
gaggtaacgctgcagggcttcaactcggtgctgaccatgctcgacggccccggtggcggt
cagggtggcggcggcggtggccgcggcggcagcgactttggcggcggtgacgatttcggc
ggcggcgacttcggtggcgggtcgagcggctttggcggcgggtcttcgggcggcggctat
ggcggtggatcgcgcggcggatcgggcaaccagagcggcggcgggaaccatagcgggaac
gggggcaaccgtggcgggttcggacagggcggcggcttcgccgacgatctggacgacgac
gttccgttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system