KEGG   Sphingomonas sp. LK11: AV944_03355
Entry
AV944_03355       CDS       T04954                                 
Name
(GenBank) translation initiation factor IF-2
  KO
K02519  translation initiation factor IF-2
Organism
splk  Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:splk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:splk03012]
    AV944_03355
   03029 Mitochondrial biogenesis [BR:splk03029]
    AV944_03355
Translation factors [BR:splk03012]
 Eukaryotic type
  Initiation factors
   MTIFs
    AV944_03355
 Prokaryotic type
   AV944_03355
Mitochondrial biogenesis [BR:splk03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial translation factors
    AV944_03355
SSDB
Motif
Pfam: IF-2 GTP_EFTU IF2_N MMR_HSR1 IF2_assoc FeoB_N GTP_EFTU_D2 PduV-EutP Arf SRPRB Dynamin_N Roc Ras MMR_HSR1_Xtn
Other DBs
NCBI-ProteinID: APX65034
Position
700077..702992
AA seq 971 aa
MSETDNDKPKLGMRQPLGLKRTVETGKVKQSFSHGRSNTVIVETKRRRVLGPQGGAPEAA
APAPTPAPAPAAPVAAAPVAPPRPVPSNETAQERQARLLREAEEQRLAMQEEIRRREDAE
RQQRAEDERVRAEERARAAAEAAAAPPPAPEPAPEAAPEPQPAAEPAPAPVAEAPVQAPV
QAEAPAAPTISVQPRMFRPVERPVIPAPEPKVEAPKVEAPAPTPAPAPTPAPAPVAAKPA
PAPAPTPAPAPVVPTPPILGRDPSMPAPRRFSPVQRPEIPKPAPKPAPAPAAAAAPAASA
PSNTTASAPSGGAPRSMPSGQPTPRNAPPGRPQQRDRKGDERRGGKLTVTRALNEDGARA
RSLAALKRAREKEKRGFGGPREPQVKQVRDVQVPEAITVQELANRMAEKGADLVKALFKM
GMPVTMTQTIDQDTAELLVTEFGHNIVRVSDSDIDLALDTTEDAAESLQPRPPVVTIMGH
VDHGKTSLLDALRGTDVVRGEAGGITQHIGAYQVTLKDKSKVTFLDTPGHEAFTQMRARG
ADVTDIVVLVVAADDGLMPQTIEAINHTKAAGKPMIVAINKIDKHDANAQRVRERLLEHD
VQVEDMGGETQDVEVSALKKIGLDTLIEKIQLQAELLELTANPDRAAEGSVVEAKLDKGR
GPVATVLVTRGTLKVGDVFVVGAESGKVRALVDDKGRQVKQAGPAMPVEVLGLSGVPQAG
DLLQVVENEARAREVAEYRQSVVLQKRTTSAPASLESMFSALKANQAKEYPLVVKADTQG
TVEAIVASINKIQSDLIKARILHSGVGGITESDVTLAAASGAPIIGFNVRANAKAREIAE
RNKVALKYYDVIYDLIDEIRAGMAGELGPEAFETVVGRAEIREVFSAGKIGKAAGLLVTE
GVIRKALKARITRNDVIIYQGEINSLRRFKDDVAEVRAGLECGVTFTQNFTDIKAGDYLE
TFEVELRERSL
NT seq 2916 nt   +upstreamnt  +downstreamnt
gtgagcgagaccgacaacgacaagccgaaactcggaatgcgccagcccctggggctgaag
cgcacggtcgagaccggcaaggtgaagcagagcttcagccacggccggtccaacaccgtg
atcgtcgagacgaagcgccgtcgcgtcctgggcccgcagggtggagcgcccgaggcggcg
gcccctgcaccgactccggccccggctccggctgcccccgtggcggcggcgccggtcgcc
ccgccgcgccccgttccgtcgaacgagacggcgcaggagcgtcaggcccgtctgctgcgt
gaggccgaggaacagcgcctcgccatgcaggaagagattcgtcgccgcgaggacgccgag
cgtcagcagcgcgccgaggacgagcgtgtccgtgccgaggaacgtgcgcgtgccgccgcc
gaggctgccgctgccccgccgcccgcgccggaaccggcccccgaagcggcgcccgagccc
cagcctgcggctgagcccgcccctgcgccggtcgccgaagcgcccgttcaggcccccgta
caggccgaggcgcctgccgcaccgaccatctcggtacagccgcgtatgttccggcccgtc
gaacgcccggtgatcccggcgcccgagcccaaggtggaagcccccaaggtcgaggcaccc
gccccgaccccggctcctgcgccgacccccgcacccgctccggtcgcggcgaagcctgcg
cctgcgcccgcaccgaccccggcgcctgcgccggtggtgccgacgccgccgatcctgggt
cgcgatccctcgatgcccgcgccgcgccgcttctcgccggtgcagcgtccggaaatcccg
aagcctgcgcccaagcccgcgcctgcgcccgccgcagcggcggcgcctgccgccagcgcg
ccgagcaacaccaccgcctccgctccgtcgggcggcgccccgcgttcgatgccctcgggc
cagccgacgccgcgcaacgcgcctccgggccgtccgcagcagcgcgaccgcaagggtgac
gagcgtcgcggcggcaagctgaccgtgacgcgcgccctgaacgaggacggcgcacgcgcc
cgttcgctcgccgcgctgaagcgtgcccgcgagaaggaaaagcgtggctttggcggcccg
cgcgagccgcaggtcaagcaggtccgcgacgtgcaggtgcccgaggcgatcaccgtccag
gaactggccaaccgtatggccgaaaagggcgcggatctggtcaaggcgctgttcaagatg
ggcatgcccgtcacgatgacgcagaccatcgaccaggatacggccgagctgctggtgacc
gaattcggccacaacatcgtccgcgtctccgacagcgacattgatctggcgctcgacacc
accgaggatgcggccgagagccttcagccgcgtccgccggtcgtgacgatcatgggccat
gtcgaccatggcaagacctcgctgctcgacgcgctgcgcggcaccgacgtggtgcgcggt
gaggccggtggcatcacccagcatatcggcgcctatcaggtcacgctgaaggacaagtcg
aaggttaccttcctcgacacgccgggccacgaggcctttacccagatgcgtgcccgcggc
gccgacgtcacggatatcgtggtgctggtggtggcggccgatgacgggctgatgccgcag
acgatcgaggcgatcaaccacaccaaggcggcgggcaagccgatgatcgtggcgatcaac
aagatcgacaagcacgacgccaatgcccagcgcgtccgcgagcgtctgctcgagcatgac
gtgcaggtcgaggacatgggcggtgaaacccaggacgtcgaggtttcggcgctcaagaag
atcggtctggatacgctgatcgagaagatccagcttcaggccgaactgctcgaactgacc
gccaaccccgaccgcgccgccgagggcagcgtggtcgaggccaagctcgacaagggccgt
ggtccggtcgcgaccgtgctcgtcacgcgcggcacgctgaaggtcggcgacgttttcgtc
gtcggcgcggaaagcggcaaggtccgtgcgctggtcgacgacaagggccgtcaggtgaag
caggctggtcctgcgatgccagtcgaggtcctcggtctgtcgggcgttccccaggcgggc
gacctgttgcaggtcgtcgagaacgaggcgcgtgcccgtgaggtcgccgaatatcgccag
agcgtggtgctccagaagcgcacgacctcggccccggccagcctggagtcgatgttctcg
gcgctgaaggcgaaccaggccaaggaatatccgctggtcgtgaaggcggatacgcagggc
accgtcgaggcgatcgtggcgtcgatcaacaagatccagtcggatctgatcaaggcgcgc
atcctgcactcgggcgtcggtggcatcaccgagtcggacgtgacgctggcggccgcctcc
ggcgcgccgatcatcggcttcaacgtccgtgccaacgccaaggcgcgcgagatcgccgag
cggaacaaggtggcgttgaaatattacgacgtcatctatgacctgatcgacgagatccgg
gcgggcatggccggtgagctgggccccgaggcgttcgaaacggtcgtcggccgcgccgaa
atccgcgaggtcttctcggcgggcaagatcggcaaggccgccggtctgctggtcaccgag
ggtgtcatccgcaaggcgctcaaggcgcgcatcacgcgcaacgacgtcatcatctaccag
ggcgagatcaactcgctccgccggttcaaggacgatgtcgccgaagttcgcgccggtctg
gaatgtggtgtgacgttcacgcagaacttcaccgacatcaaggcgggcgactatctcgaa
accttcgaggtcgaactgcgcgagcgttcgctctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (14)   
   Pfam (14)   
All databases (21)   

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