KEGG   Sphingomonas sp. LM7: BXU08_17840
Entry
BXU08_17840       CDS       T04824                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
splm  Sphingomonas sp. LM7
Pathway
splm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:splm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BXU08_17840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:splm03400]
    BXU08_17840
Enzymes [BR:splm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BXU08_17840
DNA repair and recombination proteins [BR:splm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BXU08_17840
SSDB
Motif
Pfam: PriA_3primeBD PriA_C DEAD ResIII PriA_CRR Helicase_C zinc-ribbons_6 AAA_30 zf_Rg AAA_16 PIF1 DZR
Other DBs
NCBI-ProteinID: AQR75997
UniProt: A0A1S6FR41
Position
complement(3792666..3794831)
AA seq 721 aa
MSRARILVLHPALGPLDYRVPQGMTVEPGSIVVVPIGPRQFAGVVWEPERLPTEEIGDNR
LRNILAVADTPPIPEPVRRLVEWTADYYLSPPSAVLAMAVRTSAAFEAAPTITEYRATGV
VPDRLTPQRAQALGRIGERQGLVRELATIADVSEGVIRGLCKVGAIEGVTVDTDSPYPLP
DPNFAPPDLSTEQADVASILRQSVTAESFQPFLLDGVTGSGKTEVYFEAVAAALASGKQT
LVLLPEIALTEPFLTRFAQRFGCEPVAWHSGLRTSQRRRAWRAISRGEAKVVVGARSALF
LPYPQLGLIVVDEAHETSFKQEEGVHYHARDVAVMRGRFEECTVVLASATPAIETRHQVE
LGRYEELKLPGRYGLAELPDIEAIDLIKEPPDRGRWLSPRLILAIDAALERGEQSLLFLN
RRGYAPLTLCRHCGHRFQCPNCTAWMVEHRLIRRLTCHHCGHTVPTPEICPECEEADSLV
ACGPGVERIADEVSVLWPDARTAIVTSDTLWSPAKAAEFVHRMEHKEIDIVVGTQLVTKG
YHFPNLTVVGVVDADLGLDGGDLRASERTFQQIMQVSGRAGRGEKPGNVFIQTHSPDARV
MQALVSGDSAAFYAAETEARRDAGAPPYGRYAAIIVSSEDKAAAEETARMIGRTAPRRDE
MHVYGPAPAPLAMLRGRHRFRLLVHARRAFDVQDMIRDWLGALEWSGKVRVAVDVDPYSF
V
NT seq 2166 nt   +upstreamnt  +downstreamnt
atgtcgcgcgctcgcatcctcgtcctccatccggcactcggcccgctcgactatcgcgtg
ccgcagggcatgacggtcgaacccgggtcgatcgtcgtcgtgccgatcggcccgcgccag
ttcgccggcgtggtctgggagcccgaacggctgccgaccgaggagatcggcgacaatcgc
ctgcgcaacatcctcgcagtcgccgatacgccaccgattcccgagccggtacgccgcctc
gtcgaatggaccgcggactattatctaagcccgccctcggcggtgctggcgatggcggtg
cgcacttcggcggcgttcgaggcggcgccgacgatcaccgaatatcgcgcgaccggcgtc
gttcccgaccggctcaccccgcagcgcgcgcaggcgctcgggcggatcggcgagcggcag
ggactggtgcgcgaactcgcgacgatcgccgatgtctcggaaggcgtgatccgggggttg
tgcaaggtcggcgcgatcgaaggcgtgacggtcgataccgacagtccctatccgctgccc
gaccccaatttcgcgccgcccgatctcagtaccgagcaggccgatgtggcgagcatcctg
cgacagtcggtaaccgcggaaagcttccagcccttcctgctcgacggggtcactgggtcg
ggcaagaccgaagtctatttcgaggcggtcgccgcggcgctcgcgtcaggcaagcagacg
ctcgtgctgctccccgagatcgcgctcaccgaacccttccttacccgcttcgcccagcgc
ttcggctgcgagccggtggcatggcattcggggctgcgcacctcacagcgccgccgagca
tggcgggcgatctcgcgcggcgaggccaaggtcgtcgtcggcgcgcgctcggcactgttc
ctgccttatccccagctcgggctgatcgtcgtcgacgaagcgcacgagaccagcttcaag
caggaagagggcgtccattatcacgcccgtgacgtcgcggtgatgcgcgggcgcttcgag
gaatgcaccgtagtcctcgcctccgccacgccggcgatcgagacacgccaccaggtcgag
ctcggccgctacgaggagctcaagctgcccggccgttacggccttgccgagctccccgac
atcgaggcgatcgacctgatcaaggagccgcccgaccgcggccgctggctgagcccgcga
ctgatcctggcgatcgacgcggcgctggagcgcggcgaacagtcgctgctgttcctcaac
cgccgcggctatgcgccgctgacgttgtgccggcactgcggccaccgcttccaatgcccg
aattgcaccgcgtggatggtcgagcaccggctgatccgccgcctcacctgccatcattgc
gggcacaccgttccgacgcccgagatctgcccggagtgcgaggaagccgacagcctcgtc
gcctgcggccccggggtcgagcggatcgccgatgaagtgtccgtgctctggcccgacgcg
cgcacggcgatcgtcacgtccgacaccctgtggtcgcccgccaaggcggcagagttcgtc
caccggatggagcataaggagatcgacatcgtcgtcggcacccagctggtcaccaagggc
tatcattttcccaacctcactgtggtcggcgtcgtcgatgccgatctcgggctcgacggc
ggcgaccttcgcgcgtccgagcgcaccttccagcagatcatgcaggtctcggggcgcgcc
ggtcgcggcgagaagccaggcaatgtcttcatccagacccattcgcccgacgcgcgggtg
atgcaggcgctcgtctcgggcgacagcgccgccttctacgccgccgagaccgaggcgcgg
cgcgacgccggtgccccgccttacggccgctacgccgcgatcatcgtgtcgagcgaggac
aaggcggccgccgaggaaaccgcgcggatgatcggccgcaccgcgccgcgccgtgacgaa
atgcacgtctatggcccggcccccgcgccgctggcgatgctgcgcggccgccaccgattc
cgcctgctcgtccatgcccgccgcgccttcgacgtgcaggacatgatccgcgactggctg
ggcgcgctcgaatggagcggcaaggtgcgcgtcgcagtcgacgtcgatccctatagtttc
gtctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (22)   

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