KEGG   Sphingobium sp. MI1205: K663_07305
Entry
K663_07305        CDS       T04383                                 
Name
(GenBank) UvrD/REP helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
spmi  Sphingobium sp. MI1205
Pathway
spmi03420  Nucleotide excision repair
spmi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:spmi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    K663_07305
   03430 Mismatch repair
    K663_07305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spmi03400]
    K663_07305
Enzymes [BR:spmi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     K663_07305
DNA repair and recombination proteins [BR:spmi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     K663_07305
   MMR (mismatch excision repair)
    Other MMR factors
     K663_07305
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 AAA_12 PcrA_UvrD_tudor AAA_11
Other DBs
NCBI-ProteinID: AMK17842
UniProt: A0A126R6Z8
Position
1:complement(1526800..1529076)
AA seq 758 aa
MTLPAPSPNDPDYLKGLNAPQREAVLTTEGPVLVLAGAGTGKTAALTARLAHLIATRRAY
PSEMLAVTFTNKAAREMRERVGRMIGPAVEGMPWLGTFHAIAAKMLRRHAELVGLQSNFT
ILDTDDQLRLMKQLIQAEGIDEKRWPARQLGGLIDQWKNKGLTPDEIGAGESEAYANGRG
QKLYAAYQARLRDVNACDFGDLLLHVLTILKRHRDVLESYQQRFRYVMVDEYQDTNSSQY
LWLRLLAQQRKNICCVGDDDQSIYSWRGAEVANILRFEKDFPGAKIVRLEQNYRSTPHIL
GAASGVIAENGNRLGKTLWTDIDVGEKVRVIGVWDGPEEARRVGDEIETIQRSGQSLEEI
AILVRAQHQTREFEDRFIQIGLPYRIVGGFRFYERAEIRDALAYLRLVNQPADDLAFERI
VNVPKRGLGGKAVEKLHRLARAEGIPLALAAARILDTDEMTPQARRSLGAFIGDLARWRD
RAAQLPHAELARQILDESGYTAMLQAERTAESAGRLENLNELTRAMEEYETLGAFLEHVS
LVMDNDAQAEERKVTIMTIHAAKGLEFDNVFLAGWEEGIFPSQRALDEGGLNSLEEERRL
AYVAITRARRLCVILHAANRRIYGQWTSSIPSRFVGELPPEHVEEESSMSGGASLWRANW
SERADPFANVHRGTGRGPGWQRAQQGGQFTREPVRIVEARASAVSLGNKGRDDMSVGLRI
FHQKFGYGIVAEIEGNKLEIDFETAGRKRVMDSFVQPA
NT seq 2277 nt   +upstreamnt  +downstreamnt
atgaccctgcccgctccttcgccgaacgatcccgactatctcaagggtctcaacgccccg
cagagagaggcggtgctgacgaccgaaggcccggtactggtgctcgcgggcgcaggcaca
ggcaagacggctgcgctcacagctcgccttgcccatcttattgccacccgccgtgcctac
ccttccgaaatgctcgccgtcacattcaccaacaaggccgcgcgcgagatgcgtgagcgg
gtcggccggatgatcggaccagcggttgagggcatgccatggctcggaacctttcacgcc
atcgcggccaagatgctacgccgtcatgccgaactggttggactgcaatccaatttcacc
atcctcgataccgacgatcagcttcgattgatgaagcagttgatccaggccgaagggatt
gacgagaagcgctggcccgcgcgccagcttggcggcctgatcgaccaatggaagaataaa
gggctgacaccagacgagatcggtgcgggagaaagcgaagcctatgccaacggacgcggc
cagaaactgtatgccgcctatcaggcgcggctgcgtgacgtaaatgcctgcgacttcggc
gacctcctgctccatgtcctgaccatattgaagcgtcatcgcgatgtgttggaaagctac
cagcagcgctttcgctacgtcatggtggacgaatatcaggataccaacagcagccaatat
ctctggctccgcctgctcgctcaacagcgcaagaatatctgctgcgtaggcgatgacgat
caatccatctactcttggcgcggcgccgaagtcgctaacatcctgcgctttgaaaaggat
tttccgggcgcgaagattgtccgtttggaacagaattaccgttcgactccgcacatcctt
ggcgcggcttcaggggtcatcgccgaaaatggcaaccgcctgggcaagacgctctggacc
gatatcgacgttggcgagaaggtgcgcgtcatcggcgtatgggatgggccagaagaggca
cgccgggtcggcgacgaaatagagaccattcagcggtctggacaatccctggaagagatc
gcgatccttgtccgggcacagcaccagacacgcgagttcgaagaccgattcatccagatc
gggctgccttaccggatcgttggcggattccgtttctatgagcgcgccgagatccgcgac
gccctcgcctatcttcgcctcgtcaaccaacctgcagacgaccttgctttcgagcggatc
gtcaacgtccccaaaagaggactgggtggcaaggccgttgaaaagctccaccgccttgca
cgcgccgagggtattccgcttgcgctcgcggctgcccgtatcctcgacacagacgaaatg
accccgcaggcgcgccgcagccttggcgcgttcatcggcgaccttgcccgctggcgcgat
cgcgcggctcaattgccccatgcggaactggcccgccagatactggatgaaagcggctac
accgcaatgcttcaagcggagcgcaccgccgaaagcgcgggtcggctggaaaatctcaat
gaactgacccgcgccatggaggaatatgaaacgctcggcgctttcctggaacatgtgtcg
ctggttatggacaatgacgctcaggccgaggagcgcaaggtcacgatcatgaccatccat
gctgcaaaggggctggagttcgacaatgtttttctcgccggttgggaagagggcattttt
ccgtcccagcgtgcccttgacgaaggcggcctcaacagcctcgaggaagaacgccgtctg
gcctatgtcgcaatcacgcgggcgcgcagactgtgcgtcattcttcatgccgccaaccgc
cggatttatgggcagtggacaagctccatcccatcgagattcgttggcgaattgccacca
gaacatgtcgaggaagaaagcagcatgtccgggggcgcttcgctctggcgcgccaactgg
tcggagcgcgcggaccccttcgccaatgtccaccgcggcacggggcgcggcccgggctgg
cagcgcgcacaacaaggtggccagtttacgcgggagccggtccggatcgtcgaggcccgc
gcctcagccgtctctctgggcaacaaggggcgcgatgacatgagcgtcggcctgcgcatc
ttccaccagaaattcggctatggcatcgtggcggagatcgaaggcaacaagctggagatc
gactttgaaaccgcgggacgtaagcgggtgatggacagtttcgtccaacctgcgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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