KEGG   Sphingobium sp. MI1205: K663_16440
Entry
K663_16440        CDS       T04383                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
spmi  Sphingobium sp. MI1205
Pathway
spmi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:spmi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    K663_16440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spmi03400]
    K663_16440
Enzymes [BR:spmi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     K663_16440
DNA repair and recombination proteins [BR:spmi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     K663_16440
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: AMK19667
UniProt: A0A126RBX3
Position
1:complement(3337353..3338150)
AA seq 265 aa
MPQTLSIASWNINSVRARLDIVERFLTEEAPDILCLQETKVVNETFPTDMFRRMGYVHQV
LNGQRMHHGVAIMSRVPIHEDDRLDWQANGEARHVGVRLDNGVRIENVYVPAGGDVPDRS
VNPKFGQKLDFLERMIQWSAQLEDKPTILTGDFNIAPMECDVWSHKQLLNVVSHTPVECE
LLERLQISNDWVDIGRKFFPAPERLYTWWSYRARDWAESDRGRRLDHMWMTQDVAAKATA
HRVVEPARSWTKPSDHVPIITEFAF
NT seq 798 nt   +upstreamnt  +downstreamnt
atgccgcagacactcagcatcgcctcctggaacatcaacagcgttcgtgcccggctcgac
attgtggaacgtttcctgaccgaggaagcgcccgacatcttatgccttcaggaaacgaag
gtggtgaacgagacattccccaccgacatgtttcgaaggatgggttatgtgcatcaggtg
ctgaacggtcaacgcatgcaccacggcgtcgcgatcatgagcagggtgccgatccatgag
gatgaccggcttgactggcaggccaatggagaggcgcggcatgtcggtgtccggctcgac
aatggcgtgcggatcgaaaatgtctatgtgccggccggcggggacgtgccggatcgctcg
gtaaatccgaaattcggccagaagctcgatttcctggagcggatgatccaatggtccgcg
cagcttgaagacaagccgacgatcctgaccggcgacttcaacatcgccccgatggaatgc
gatgtgtggagccacaagcagcttctgaacgtagtcagccatacgccggtggaatgcgaa
ctgcttgaacggctgcagatttcaaatgactgggtcgatattggccgcaaattcttcccc
gcgccggagcggctctatacctggtggagctaccgcgcacgggactgggccgaatccgat
cgggggcggcggcttgaccatatgtggatgacgcaggacgttgcggcaaaggcgaccgcc
catcgcgtcgtcgaacctgcccgaagctggaccaagccgtcggaccatgtcccgatcatt
acggagttcgccttctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system