KEGG   Streptococcus pneumoniae TIGR4 (virulent serotype 4): SP_1737
Entry
SP_1737           CDS       T00057                                 
Name
(GenBank) putative DNA-directed RNA polymerase, omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
spn  Streptococcus pneumoniae TIGR4 (virulent serotype 4)
Pathway
spn03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:spn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SP_1737
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spn03021]
    SP_1737
   03400 DNA repair and recombination proteins [BR:spn03400]
    SP_1737
Enzymes [BR:spn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SP_1737
Transcription machinery [BR:spn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SP_1737
DNA repair and recombination proteins [BR:spn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SP_1737
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AAK75813
UniProt: P66730
Position
complement(1642146..1642457)
AA seq 103 aa
MLKPSIDTLLDKVPSKYSLVILEAKRAHELEAGAPATQGFKSEKSTLRALEEIESGNVTI
HPDPEGKREAVRRRIEEEKRRKEEEEKKIKEQIAKEKEDGEKI
NT seq 312 nt   +upstreamnt  +downstreamnt
atgttaaaaccctctattgataccttgctcgacaaggttccttcaaaatattcactcgta
atcttggaagcaaaacgtgcccacgaattggaagcaggtgccccagcaactcaaggtttc
aagtctgaaaaatcaactcttcgcgctttagaagaaatcgaatcaggaaacgttacaatt
cacccagatccagaaggaaaacgtgaagcagtgcgtcgccgtatcgaagaagaaaaacgc
cgcaaagaagaagaagaaaagaaaatcaaagagcaaattgctaaagaaaaagaagatggt
gaaaaaatttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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