KEGG   Schizosaccharomyces pombe (fission yeast): 2541030
Entry
2541030           CDS       T00076                                 
Symbol
ubi4, SPOM_SPBC337.08C
Name
(RefSeq) protein modifier, ubiquitin
  KO
K08770  ubiquitin B/C
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    2541030 (ubi4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:spo04121]
    2541030 (ubi4)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spo04147]
    2541030 (ubi4)
Ubiquitin system [BR:spo04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   2541030 (ubi4)
Exosome [BR:spo04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   2541030 (ubi4)
  Exosomal proteins of other body fluids (saliva and urine)
   2541030 (ubi4)
  Exosomal proteins of colorectal cancer cells
   2541030 (ubi4)
  Exosomal proteins of bladder cancer cells
   2541030 (ubi4)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 Rad60-SLD_2 TBK1_ULD DUF2604 Dsc3_N Ubiquitin_5 UBL_UBAC1
Other DBs
NCBI-GeneID: 2541030
NCBI-ProteinID: NP_595409
PomBase: SPBC337.08c SPBC337.08c.1
UniProt: P0CG72
Structure
Position
II:complement(1044418..1045566)
AA seq 382 aa
MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGLF
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgcagattttcgtcaagacattaactggaaagactattacattggaagttgaatcttcc
gataccattgacaatgtaaagagcaagattcaggataaggaaggcattcctcctgatcaa
caacgtcttatttttgctggtaagcaacttgaagatggacgtactctttcagattacaac
attcaaaaggagtctactcttcaccttgttcttcgtcttcgtggcggtatgcaaattttt
gtcaaaaccttgactggtaaaaccattacattggaagttgagtcttctgacaccattgat
aacgtaaagagcaagattcaggataaggaaggcattcctcctgatcaacaacgtcttatt
tttgctggtaagcaacttgaagatggacgtactctttcagattacaacattcaaaaggag
tctactctacatcttgttcttcgtcttcgtggcggtatgcaaatttttgtcaaaaccttg
actggtaaaaccattacattggaagttgagtcttctgacaccattgataacgtaaagagc
aagattcaggataaggaaggcattcctcctgatcaacaacgtcttatttttgctggtaag
caacttgaagacggacgtactctttcagattacaacattcaaaaggagtctactcttcac
cttgttcttcgtcttcgtggcggtatgcaaatttttgtcaaaaccttgactggtaaaacc
attacattggaagttgagtcttctgacaccattgataacgtaaagagcaagattcaggat
aaggaaggcattcctcctgatcaacaacgtcttatttttgctggtaagcaacttgaagac
ggacgtactctttcagattacaacattcaaaaggagtctactctacatcttgttcttcgt
cttcgtggcggtatgcaaatttttgtcaaaaccttgactggtaaaaccattacattggaa
gttgagtcttctgacaccattgataacgtaaagagcaagattcaggataaggaaggcatt
cctcctgatcaacaacgtcttatttttgctggtaagcaacttgaagatggacgtactctt
tcagattacaacattcaaaaggagtctactcttcaccttgttcttcgtcttcgtggcggt
cttttttaa

  All links  
Gene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   POMBASE (2)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (3)   
   PDB (3)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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