KEGG   Schizosaccharomyces pombe (fission yeast): SPAC1250.01
Entry
SPAC1250.01       CDS       T00076                                 
Symbol
snf21
Name
(RefSeq) ATP-dependent DNA helicase Snf21
  KO
K11786  ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:spo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spo03021]
    SPAC1250.01 (snf21)
   03036 Chromosome and associated proteins [BR:spo03036]
    SPAC1250.01 (snf21)
Enzymes [BR:spo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.-
     SPAC1250.01 (snf21)
Transcription machinery [BR:spo03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SWI/SNF complex
     SPAC1250.01 (snf21)
    RSC complex
     SPAC1250.01 (snf21)
Chromosome and associated proteins [BR:spo03036]
 Eukaryotic type
  Chromatin remodeling factors
   RSC complex
    SPAC1250.01 (snf21)
   SWI/SNF complex
    SPAC1250.01 (snf21)
SSDB
Motif
Pfam: SNF2-rel_dom HSA Helicase_C Bromodomain ResIII SnAC DEAD DBINO QLQ
Other DBs
NCBI-GeneID: 2542638
NCBI-ProteinID: NP_594861
PomBase: SPAC1250.01
Ensembl: SPAC1250.01
UniProt: Q9UTN6
Position
I:complement(5100148..5104194)
AA seq 1199 aa
MRAEKQYTRNEVEETIVRWKKLKESGATEHDNTEYAQLCDVLRSAQSEIEARRDLKGHIK
RCFSSVDKNTEKLILKQQVLAYKKLSQNLPAPDDCILSVLLRLSKDEQLLQSIVKQPLQN
SKVDGKVRRDFGSCQITPSAKQQRKYLQYQISEDDAIKNRMFRRMSDLESYPAVMRDVAE
LKDDNERLNLDTIKRNALVELKKLRLIKQQESLRHQVMHCQPHLRTIVNAVERMSCRRPK
LVPQATRLTEVLERQQRSDRERRLKQKQCDYLQTVCAHGREINVRTKNAQARAQKANRAV
LAYHSHIEKEEQRRAERNAKQRLQALKENDEEAYLKLIDQAKDTRITHLLRQTDHYLDSL
AAAVKVQQSQFGESAYDEDMDRRMNPEDDRKIDYYNVAHNIREVVTEQPSILVGGKLKEY
QLRGLQWMISLYNNHLNGILADEMGLGKTIQTISLITHLIEKKRQNGPFLVIVPLSTLTN
WTMEFERWAPSIVKIVYKGPPQVRKALHPQVRHSNFQVLLTTYEYIIKDRPLLSRIKWIY
MIIDEGHRMKNTQSKLTNTLTTYYSSRYRLILTGTPLQNNLPELWALLNFVLPRIFNSIK
SFDEWFNTPFANTGGQDKMELTEEESLLVIRRLHKVLRPFLLRRLKKDVEAELPDKVEKV
IRCQMSGLQQKLYYQMKKHGMLYVEDAKRGKTGIKGLQNTVMQLKKICNHPFVFEDVERS
IDPTGFNYDMLWRVSGKFELLDRILPKLFRSGHRILMFFQMTQIMNIMEDYLHYRQWRYL
RLDGSTKADDRSKLLGVFNDPTAEVNLFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDL
QAQDRAHRIGQTKEVRIYRLITEKSVEENILARAQYKLDIDGKVIQAGKFDNKSTPEERE
AFLRSLLENENGEEENDEKGELDDDELNEILARGDDELRLFKQMTEDLERESPYGKNKEK
ERLIQVSELPEFYQREEPEKTTDLLQEEPLGRGARRRTPVVYDEAVRDAQWMAEMDMESE
ARPTRGRPKRNIASVDETPALTLNGKPKKKRGPAPDTLTSEHRSLLRRVCLEIYKAVNEL
EDDNGRPLNKLFLELPSKKLYPDYYMIIKSPIALDAIRKHINGTFYKTLEAMKSDLMTMF
NNARTYNEEGSFVYEDANKMQTAMETKIEELEEDGTLATLRGMEAEATSQLEDRIENEA
NT seq 3600 nt   +upstreamnt  +downstreamnt
atgcgtgcagagaagcaatacacgagaaatgaagtggaagaaacaattgtgcgatggaag
aaattgaaagagtctggcgctactgagcacgataatacggaatatgctcaattgtgtgat
gttttgcgatcagcacagtcagaaattgaagcacggagggatttaaaaggacacattaaa
aggtgtttctcttccgtagataagaatacggagaaactgattttgaaacaacaagttttg
gcttacaaaaagctttctcaaaatcttccagcacccgacgactgtatactatctgtgtta
cttaggctttccaaagatgagcaattgcttcagagtatagttaaacagcctttacagaac
tctaaagtcgatgggaaggtgcgacgcgattttggctcttgtcaaataacaccatcagca
aagcagcaaagaaaatacttgcaatatcaaatttcggaagatgatgctataaagaatagg
atgttccgacgaatgtcggatttggaaagctatccggctgtgatgcgggatgttgcagaa
ttaaaagatgacaacgaacgtttaaacttggatactatcaaacgtaatgcgctagttgaa
ttgaagaaattacgactcatcaaacagcaagaatctcttcgccatcaagtgatgcattgc
caaccgcatttacgtaccatagttaatgccgtagaacgcatgtcatgccgccgtcctaag
ctagttcctcaagctacacgcctgactgaagtattagagcgccagcaaagaagtgatcgc
gaaagaaggttaaagcaaaaacagtgcgattatctgcaaactgtatgtgcccatggtcga
gagattaatgtccgaaccaagaatgctcaggcaagggctcagaaagcgaatcgcgctgta
ttggcgtatcattcgcatatcgaaaaagaagaacagcgtcgtgctgaacgcaatgcaaag
caaagattacaagccttgaaggagaatgatgaggaggcctacttgaaacttattgatcaa
gcgaaggatacaagaattactcatttattacggcaaactgatcattacttggattccttg
gcggctgctgttaaagtacaacagtctcaatttggtgaatcggcctatgacgaagatatg
gatcgccgaatgaatcctgaagacgatagaaagattgattattataatgttgctcataat
attcgtgaagtcgtcactgaacagccttctattttagtaggaggaaagctgaaggaatat
caactacgtggtttgcaatggatgatttcactgtataataatcatttgaacggtattctt
gctgatgaaatgggcttaggtaaaactattcagacaatctctcttattacccacttaatc
gagaaaaaacggcagaatgggccatttttggtaattgttcctttatcgaccttaacaaat
tggaccatggaatttgaaagatgggcgccatcaattgtaaagattgtttacaaaggacct
ccacaagttcgaaaagctttgcatcctcaagttcgtcactctaatttccaagttcttttg
acgacatacgagtatatcataaaagatcgaccacttttaagtcgtattaaatggatttat
atgatcattgatgaaggacatcgtatgaaaaacacacaatccaagttaacaaatacttta
actacctattattcatcacgttatcgtcttatccttacaggaactcctttacaaaacaat
cttccggaactttgggctttgcttaattttgtattaccacggatttttaattccattaaa
agttttgatgagtggttcaatactccttttgctaatacaggcgggcaggataagatggaa
cttacagaagaagaatctttgcttgtcattcgccgtcttcacaaggtcttacgtcctttt
cttttgcgacgtcttaaaaaggatgttgaagccgagcttcctgataaagttgagaaggtt
attcgttgtcagatgtcggggcttcagcaaaagctctattatcaaatgaagaagcatgga
atgttgtatgtggaagatgctaaacgcggtaaaactggtatcaaaggcttacagaatacg
gtcatgcagttgaagaaaatctgtaatcatccttttgtgtttgaagacgtggaacgttca
attgatccaacaggatttaactatgatatgttgtggagagtttctggcaaattcgaactg
ttagaccgtattttgcctaaactgtttcgttctggtcatcgtatattaatgtttttccaa
atgactcaaattatgaatatcatggaggattacctgcattatcgtcagtggagatatctg
cggcttgatgggtctaccaaagctgatgatcgttcaaagttattgggagtatttaatgat
ccgactgctgaagtaaatttgtttttgttaagtactcgtgctggtggacttgggcttaat
cttcaaactgctgatactgtaataattttcgactcggattggaacccacatcaagatttg
caggcacaagatcgtgctcatcgtattggacaaaccaaagaggttagaatttatcgactg
attactgaaaaatcggtagaggaaaacattcttgctagagcccaatataaattggacatt
gatggcaaagttattcaagcaggaaaatttgacaacaagtcaacaccagaggaacgtgag
gcgtttttgcgttcgctcttggagaacgaaaacggtgaagaagaaaatgatgagaagggc
gagttagatgacgatgaactcaatgagatacttgcccgaggtgacgatgagttgcgactt
ttcaaacaaatgactgaagatttggagagggaatcgccatatggtaagaataaagaaaaa
gaaagactcatccaagtaagtgagcttcctgaattttaccaaagggaagaacctgagaaa
accaccgacttgttgcaggaagaaccactcggtagaggagcccgcagacgtaccccagtt
gtatatgacgaagcagtacgagatgctcagtggatggcagaaatggatatggaatctgaa
gctcgtccaactcgtggtcgcccaaagcgtaatatagcgagtgttgacgaaacacctgct
cttacactcaatggaaagccaaagaagaaacgtggaccggctccggatacacttacttca
gagcaccgttcgctacttcgtcgtgtgtgccttgaaatatacaaggccgttaatgagctt
gaagatgataatggtcgtcctctgaataaactatttttggagcttcctagtaagaagtta
tatcctgattattacatgataattaaatcccctatcgcacttgatgcaattagaaagcat
atcaatggcactttctataaaactttagaagctatgaaatcggatcttatgacaatgttt
aataatgctaggacgtataatgaggaaggttcttttgtctatgaagatgcgaacaaaatg
caaacggctatggaaaccaaaattgaagaactggaagaggatggcacattagcaacgctt
cgcggaatggaggcggaggctacatcgcaattggaagacagaattgaaaatgaggcttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (56)   

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