KEGG   Schizosaccharomyces pombe (fission yeast): SPAC19A8.05c
Entry
SPAC19A8.05c      CDS       T00076                                 
Symbol
sst4
Name
(RefSeq) ESCRT 0 complex subunit sst4
  KO
K12182  hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03250  Viral life cycle - HIV-1
spo04144  Endocytosis
spo04145  Phagosome
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    SPAC19A8.05c (sst4)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    SPAC19A8.05c (sst4)
   04145 Phagosome
    SPAC19A8.05c (sst4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:spo04131]
    SPAC19A8.05c (sst4)
Membrane trafficking [BR:spo04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-0 complex
    SPAC19A8.05c (sst4)
SSDB
Motif
Pfam: VHS FYVE Vps27_GAT-like UIM FYVE_2 IBR FYVE_CARP1-2 CoV_nucleocap
Other DBs
NCBI-GeneID: 2542403
NCBI-ProteinID: NP_593787
PomBase: SPAC19A8.05c
Ensembl: SPAC19A8.05c
UniProt: O13821
Position
I:2477864..2480031
AA seq 610 aa
MSRWWNSNSQFASDIEKATSETLPAGSEEISLYLEISDQIRSKSVDPKFAMRILKSRIDH
SNPNVQIMALKLTDTCVKNGGSGFLLEIASREFMDNLVSILRSPAGIDEDVKMVILRYIQ
SWALAVPDTNSPLSYIIHVYQNLKDGDYEFPEPSQNITSKFLDTETPPDWTDSEVCLRCR
TPFTFTNRKHHCRNCGGVFCNQCSSKTLSLPHLGINQPVRVCDSCYSLRTKPKGSKSRAR
NERKFHAKTRKTPSKPVTNNEDEDIKRAIELSLKEMPQSREPPSYERPSEANVVISQDQH
LTEDEDEELKRAIAISLEEAQKSSQKDDNVTAPNNMNISYPSVPAHTVSTDIRSSPFSGR
PSDNPSTLISTADADNITLYATLVQKLKKLPPGSIFTEYQLQELHENMGVMRTRMMRSLG
ETMSKYNGLIQALQKLQTCMRLNDALIEQRLSSTYAHHYIDSSMDSNRSIEPEPDVISTV
RNSSTIPQASSSSVPKIVVDSSPVTENPPSHSDVMGQKDTISSYYSTDTDVSANVMGNRH
DEVVFSDTASGEKNTKLNIDESTNYYNTDSIDKVGEPFDEISSGYDDLMNGNDKQGNDIP
EVQEASLIEL
NT seq 1833 nt   +upstreamnt  +downstreamnt
atgtctcggtggtggaattccaattctcagtttgcttccgacatagaaaaggctacatcg
gaaacgcttcctgctggctctgaagaaatttcattatatttagaaatttctgatcaaata
cgtagtaagtctgttgatccgaaatttgctatgcgtattcttaaatcccgaattgatcat
tcgaatccgaatgttcaaataatggcattgaagttgacagatacctgcgttaaaaatggg
ggttccggttttttattggaaatagcttctagagagtttatggataatttggtatctatt
ctacgatctcctgcaggaatagacgaagacgttaaaatggtcattttacgatacattcag
tcttgggctttggcagttccagataccaattctccacttagttatattattcatgtttat
caaaatttaaaagacggtgattatgagttccctgagccttctcagaacattactagcaaa
tttttagatactgaaacaccgcccgattggacagatagtgaagtttgtcttcgttgtcgt
acaccttttacattcactaatcgtaaacaccattgtagaaattgcggtggcgtgttttgc
aatcaatgttcttcaaaaacactttctcttcctcaccttggaattaaccagcctgttagg
gtatgcgacagttgttattcattacgtacgaaacccaaaggttccaaatcaagagcgcga
aatgaaaggaaattccatgcgaagactagaaagacaccctctaaacccgtaactaataat
gaagacgaagatatcaaaagagctattgagctttccctcaaagaaatgcctcaatcacga
gaacctccatcttatgaaagaccttcagaggccaatgtagttattagtcaagaccaacat
cttacagaagacgaagatgaagagcttaaacgtgctattgctatcagccttgaggaagca
cagaagtcatctcaaaaggatgacaatgttacggcacctaacaatatgaatatttcttac
cctagtgttccagctcacaccgtttcaactgatattcgatcatctcctttctctggtagg
ccgagtgataatccttctactttaatttctactgcggatgctgataacatcactttatat
gctactttggtgcaaaagttaaaaaagctaccacctgggtctatttttacggaatatcag
ctacaggaactccacgaaaatatgggtgttatgcgaactcgtatgatgcgatcgcttggt
gaaacaatgagtaaatataacgggctaattcaagctttgcaaaagctccaaacttgtatg
cgattgaatgatgctctaatagaacaaagactttcatccacgtatgcacatcattatatt
gattctagcatggattcaaaccgatcaattgaacctgagccggatgtaattagcactgtg
aggaatagttcaaccattccccaggcttcgtcttcttctgtcccgaaaatcgttgtcgat
tcgtctccggtaacagaaaatccccctagtcattctgatgtgatgggtcagaaagatact
atctccagttattactcgacggatacagacgtttctgcgaatgtaatgggaaatcgacac
gatgaagttgtattttctgacaccgcatctggtgaaaagaatacaaaattaaatatcgat
gaaagtaccaactattataatactgattcaatcgataaagttggagagccttttgacgaa
atttcctctggttatgatgatttaatgaatggcaatgataagcaaggtaatgatattcct
gaagttcaagaagcatctttaatcgagctttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (56)   

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