KEGG   Schizosaccharomyces pombe (fission yeast): SPAC19B12.08
Entry
SPAC19B12.08      CDS       T00076                                 
Symbol
atg4
Name
(RefSeq) putative Atg8 deconjugator Atg4
  KO
K08342  cysteine protease ATG4 [EC:3.4.22.-]
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo04136  Autophagy - other
spo04138  Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:spo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04138 Autophagy - yeast
    SPAC19B12.08 (atg4)
   04136 Autophagy - other
    SPAC19B12.08 (atg4)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:spo01002]
    SPAC19B12.08 (atg4)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:spo04131]
    SPAC19B12.08 (atg4)
   03029 Mitochondrial biogenesis [BR:spo03029]
    SPAC19B12.08 (atg4)
Peptidases and inhibitors [BR:spo01002]
 Cysteine peptidases
  Family C54: Aut2 peptidase family
   SPAC19B12.08 (atg4)
Membrane trafficking [BR:spo04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    SPAC19B12.08 (atg4)
Mitochondrial biogenesis [BR:spo03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    SPAC19B12.08 (atg4)
SSDB
Motif
Pfam: Peptidase_C54 Peptidase_C78
Other DBs
NCBI-GeneID: 2542182
NCBI-ProteinID: NP_594771
PomBase: SPAC19B12.08
Ensembl: SPAC19B12.08
UniProt: Q9P373
Position
I:4897936..4900012
AA seq 320 aa
MELMARFLERYLHFAPTNTEPPGTLIWFLGHSYKIEDSQWPEKFLYDSFSLITITYRSGI
EGLENMTSDTGWGCMIRSTQTLLANCLRICYPEKQLKEILALFADEPSAPFSIHQFVTMG
KTLCDINPGQWFGPTTSCSCVARLSDQNPDVPLHVYVARNGNAIYRDQLSKVSFPVLLLI
PTRLGIDSINESYYDQLLQVFEIRSFVGITGGRPRSAHYFYARQNQYFFYLDPHCTHFAH
TTTQPASEETFHSATLRRVAIQDLDPCMIFGFLIRDEEEWHSFEANQKYFADIVQIFDSE
PQPVETHDDFVLDENVEDHL
NT seq 963 nt   +upstreamnt  +downstreamnt
atggagcttatggctcgctttctagagcgatatttacattttgcaccgacaaacaccgag
cctccagggacattaatttggtttttaggacattcttacaaaattgaagatagccaatgg
cctgaaaaatttttatacgactcattctctcttattacaatcacttatcgtagtggtatt
gaagggcttgaaaatatgacatctgacaccggttggggttgtatgattcgatccactcag
acactattagcaaattgtttacgaatctgctatcctgaaaaacaattgaaagaaatattg
gcactatttgctgatgagccttcagcccctttttctatccatcaatttgttacaatgggc
aaaactttgtgcgatattaatccagggcaatggtttggacctacaacatcttgttcttgt
gttgctcgattaagtgatcagaacccggacgtcccattacacgtttatgttgccaggaat
ggaaatgctatataccgagatcaactttcaaaggtctcctttcctgttttacttttaatt
cctacccgtttaggaattgattcaattaatgaatcatactacgatcagttgcttcaggtg
tttgaaattcgttcatttgttggcatcactggaggtcgtccaaggtctgctcattacttt
tatgcaagacaaaatcagtactttttttatctggatcctcattgtactcactttgctcac
actaccacccagcctgcttccgaggaaacttttcatagtgctactttacgaagagtagca
atacaagatcttgatccctgtatgatctttgggttcttaattcgagatgaagaagaatgg
cattcatttgaagcgaatcaaaaatattttgccgacatagttcagattttcgactccgaa
cctcaaccagtcgagacacatgatgatttcgttttggatgagaatgttgaagatcatctt
taa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (40)   

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